Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1227 ATGGTTAGGCCAATGACAGGGCTTGGCTCTTCATGTGGAGCATGCAAGTTTCTCCGGAGAAAGTGTACTGCTGACTGCATATTTGCTCCTTACTTCTCCTATGACCAGGCTGCTACTCATTTTGCAGCAGTGCACAAGGTTTTTGGCGCTAGTAACGCCTCTAGGCTACTGCTACACTTACCGGTGCAGAGTAGAAGTGATGCAGCCATCACCGTGTCTTACGAGGCACTCGCTCGGATGCATGATCCTGTATATGGTTGTGTTGCTCAAATCTTTGCCCTGCAGCAACAGGTTGCAACCTTGCAAGAGGAAATAGATAAACTTGGTAGTATGATAGTTAACTCTCCTGTTGGTGCTGCCATTTCTGGTGGCAGTTCTCAGGCCTCAACAAGCAGAAACACAGATGGGATAGATTTTTCTTGGCAGCAAGATGCAATAAATACACAACTTTATCAGACTCAACTATCTACTCTGCTTTCTCACCAAGCAAGTGCTGCTGCTGCATACCAAGGCTTGGAAGGACATATGAATTTGGATTTTCCCAACGCTCTTCAATTTGAAGACCATGTATTTGATGAGTCAGACCCTAATTCATTAGAGAAGCTCCTATCAGGAATTGACCAACAGCTTTTCGTCAATCATCCTTGA 648 0.4522 MVRPMTGLGSSCGACKFLRRKCTADCIFAPYFSYDQAATHFAAVHKVFGASNASRLLLHLPVQSRSDAAITVSYEALARMHDPVYGCVAQIFALQQQVATLQEEIDKLGSMIVNSPVGAAISGGSSQASTSRNTDGIDFSWQQDAINTQLYQTQLSTLLSHQASAAAAYQGLEGHMNLDFPNALQFEDHVFDESDPNSLEKLLSGIDQQLFVNHP 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1227 215 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 156 - -
Mibi08g1227 215 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Mibi08g1227 215 ProSiteProfiles LOB domain profile. 10 112 IPR004883 -
Mibi08g1227 215 Coils Coil 91 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1227 Mibi-ChrMibi08 27833050 27833766 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1227 5 114 AS2 family AT5G06080 73.636 2.84e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi08g1227 LOB 1.4e-34 No_clan