Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1204 ATGGGTTGCTGCTTTAGCGTGAAGATCAAATCTGAAAACCTTTCACATAAAGATGTGAATTTGACCCATGATAACAGAGAAGAGGATGGTTCCATTGGTGGAGCCAAAAAGGCCTCCCAACTGAAAGTTTTCACATTTGATGAGCTGAGAAGAGCCACAAGGAACTTTCGTAAGGACGCTGTGGTGGGTGAAGGTGGGTTTGGTGGTGTATTTAGGGGGTGGTTTGATGAGCTGACACTTGCACCTGCCAAACCTGGTACTGGGATTGTCTTTGCTGTGAAGAAGCTTAACCTAGAAGACTTTAAGGGATACAATGAATGGTTGACAGAGATCAATTTTTTGGGACAGCTGCATCATCCTAACATTGTGAAATTGATTGGCTACTGCTTAGAAGATGAGCACCGGCTTTTGGTATATGAGTTTTTTCCCAAATGCAGCTTGGATAATCATTTATTTAGAGGGTCATCTGATTTCGAAACACTTTCTTGGAGCAACCGCATGAAAATTGCCCTTGGTGCTGCCAAGGCTCTTGCATTTCTTCATAGCGACGAAGTAAATGTGATACATCGAGATTTGAAACCTTCTGCAATATTGCTTGATTCAAACTTGAATCCAAAGCTATCTGATTTTGATTTGTCAAGGGCCGGGCCATCGGGTGATGAGAGCCCTGTCTCTACAGAGGTCATGGGCACATATGGCTATGTTGCCCCTGAGTATATAGCCACAGGTCACCTGACCAAGAGGTGTGATGTATACTCTTTTGGGGTTGTTCTCCTTGAACTTATGTCAGGCAGACGTTCAGTGGACGGAAACAGGCGATGCGGTGAACAGAATCTAGTCGATTGGGGCAAGCCGTACCTTTCGTACCCGCGCCGAATTTCCCAAGTGATGGATGCCCGTATCAATGGCCAGTACCGAGTGCATGAAGCCAGGAAAGTGGCAAAAATCACGGTTCAATGCCTGTCTGCAGATCCCGGGTTGAGACCGACCATGATCGATGTGGTAAGTGCATTGGAACAACTTCATGATTCCAGAGATATAGGTAGCTCAAAGCAGTAG 1059 0.4561 MGCCFSVKIKSENLSHKDVNLTHDNREEDGSIGGAKKASQLKVFTFDELRRATRNFRKDAVVGEGGFGGVFRGWFDELTLAPAKPGTGIVFAVKKLNLEDFKGYNEWLTEINFLGQLHHPNIVKLIGYCLEDEHRLLVYEFFPKCSLDNHLFRGSSDFETLSWSNRMKIALGAAKALAFLHSDEVNVIHRDLKPSAILLDSNLNPKLSDFDLSRAGPSGDESPVSTEVMGTYGYVAPEYIATGHLTKRCDVYSFGVVLLELMSGRRSVDGNRRCGEQNLVDWGKPYLSYPRRISQVMDARINGQYRVHEARKVAKITVQCLSADPGLRPTMIDVVSALEQLHDSRDIGSSKQ 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1204 352 Gene3D Transferase(Phosphotransferase) domain 1 143 351 - -
Mibi08g1204 352 ProSiteProfiles Protein kinase domain profile. 56 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1204 352 Gene3D Phosphorylase Kinase; domain 1 27 141 - -
Mibi08g1204 352 PANTHER OS01G0588500 PROTEIN-RELATED 37 342 - -
Mibi08g1204 352 SUPERFAMILY Protein kinase-like (PK-like) 39 341 IPR011009 -
Mibi08g1204 352 Pfam Protein kinase domain 57 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1204 352 ProSitePatterns Protein kinases ATP-binding region signature. 62 95 IPR017441 GO:0005524
Mibi08g1204 352 FunFam Serine/threonine-protein kinase BIK1 23 141 - -
Mibi08g1204 352 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 142 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1204 Mibi-ChrMibi08 27425777 27428648 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1204 17 338 Glycoside Hydrolase AT3G07070 44.444 1.55e-90 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi08g1204 Pkinase 1.8e-42 CL0016