Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1202 ATGGGTTGCTGCTTTAGTGCTAGAATCAAAGCTGAAAGCCCTCCACGAAAGGGTAGGAAGTTAAGCCATGACAGCAAAGAAGAGGATAATTTGATGGATGGAAGCAGCAAGTTCTCCACTTCCTCGGTGCCTCCAACTCCGGCTCCTCGAACTGAGGGTGAGATCTTGCAGTCCTCCAATTTGAAGAATTTCACTTATAATGAGCTGAGAATAGCTACAAGGAACTTCCGTCCAGACAGTATGGTGGGCGAAGGCGGGTTTGGTGGTGTATTTAAGGGGTGGCTTGATGAGCAGACGCTTGCACCTGCTAAACCTGGCACTGGGATAGTCATTGCTGTCAAGAAGCTTAACCAGGAAGGCTTTCAGGGACACAATGAGTGGTTGACAGAGATCAATTTTCTGGGGCAGCTGCATCATCCTAACCTTGTGAAATTGATTGGCTACTGCTTGGAGGATGAGCACCGGCTCTTGGTCTATGAGTTCTTGACCAAAGGCAGCTTGGACAATCATTTATTTCGAAGGACATCACATGTTGAACCGCTTTCTTGGAGCAACCGCATGAAAATTGCCCTTGATGCTGCAAAGGGTCTTGCATTTCTTCATAGTGATGGAGTAAAAGTGATATATCGAGACATGAAAGCTTCTAATATCTTGCTTGGTTCAAACTTCAATGCAAAGCTATCTGATTTTGGATTGGCAAAGGATGGACCATCCGGTGATAGGAGCCATGTCTCTACAAGGGTCATGGGCACTTATGGCTATGCTGCTCCTGAGTATATGGCCACAGGTCACTTGACCAAGAAGAGTGATGTCTACACTTTCGGGGTTGTTCTGCTTGAAATCATGTCAGGCAAACGAGCATTGGACAGAAACAGGCCAGCCAGGGAACAAAATTTAGTTGAATGGGCCAAGCCATACCTCTCAAGCAAGCGCCGGATTTTCCAAGTTATGGATGCTCGTATCGAGGGCCAATATGTGGTACGTGAAGCTATGAGAGTAGCAAAAATCGCAATCCAATGCCTGTCCGTAGAACCCCGGTTCAGACCGACCATGGCCGACGTGGTAATAGCATTGGAACAGCTTCAGGATACCACTGATACAGGTAGCTCAAGTGGTAATAGTAGTACTGTTCCAAAGCAGAATAAGAGAAGTACGAATGAGTCTTTAAATGGGGTTGGCACTTCTGAACCCAGACCATCTACTTCACAGTCCACATGA 1218 0.4663 MGCCFSARIKAESPPRKGRKLSHDSKEEDNLMDGSSKFSTSSVPPTPAPRTEGEILQSSNLKNFTYNELRIATRNFRPDSMVGEGGFGGVFKGWLDEQTLAPAKPGTGIVIAVKKLNQEGFQGHNEWLTEINFLGQLHHPNLVKLIGYCLEDEHRLLVYEFLTKGSLDNHLFRRTSHVEPLSWSNRMKIALDAAKGLAFLHSDGVKVIYRDMKASNILLGSNFNAKLSDFGLAKDGPSGDRSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYTFGVVLLEIMSGKRALDRNRPAREQNLVEWAKPYLSSKRRIFQVMDARIEGQYVVREAMRVAKIAIQCLSVEPRFRPTMADVVIALEQLQDTTDTGSSSGNSSTVPKQNKRSTNESLNGVGTSEPRPSTSQST 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1202 405 Gene3D Transferase(Phosphotransferase) domain 1 162 385 - -
Mibi08g1202 405 FunFam Serine/threonine-protein kinase PBS1 162 376 - -
Mibi08g1202 405 MobiDBLite consensus disorder prediction 12 33 - -
Mibi08g1202 405 Gene3D Phosphorylase Kinase; domain 1 51 161 - -
Mibi08g1202 405 ProSiteProfiles Protein kinase domain profile. 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1202 405 Pfam Protein tyrosine and serine/threonine kinase 80 356 IPR001245 GO:0004672|GO:0006468
Mibi08g1202 405 SMART serkin_6 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1202 405 MobiDBLite consensus disorder prediction 364 405 - -
Mibi08g1202 405 ProSitePatterns Protein kinases ATP-binding region signature. 82 115 IPR017441 GO:0005524
Mibi08g1202 405 MobiDBLite consensus disorder prediction 1 54 - -
Mibi08g1202 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Mibi08g1202 405 PANTHER OS01G0588500 PROTEIN-RELATED 38 362 - -
Mibi08g1202 405 MobiDBLite consensus disorder prediction 34 54 - -
Mibi08g1202 405 FunFam Serine/threonine-protein kinase BIK1 44 161 - -
Mibi08g1202 405 SUPERFAMILY Protein kinase-like (PK-like) 45 355 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1202 Mibi-ChrMibi08 27405018 27407713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1202 54 378 Glycoside Hydrolase AT3G07070 48.466 2.67e-106 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi08g1202 PK_Tyr_Ser-Thr 1.4e-46 CL0016