Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi08g1197 | ATGAGAAAGCCTTGCTGTGACAAAGAAGACACCAACAAAGGAGCTTGGTCTAAACAAGAAGACCAAAAGCTCATCGATTACATCCAATCTCATGGTGAAGGTTGCTGGCGTTCCCTCCCCAAAGCTGCAGGGCTGCATCGTTGTGGAAAGAGTTGCAGGCTGAGATGGATAAATTATTTGAAACCCGACATCAAACGAGGAAACTTTGCCCAAGACGAAGAAGACCTCATCATCAAGCTCCATGCCCTCCTCGGCAACCGGTGGTCTCTAATAGCTGGAAGATTGCCTGGAAGAACAGATAATGAGGTAAAGAACTATTGGAATTCTCACATCCGCAGGAAGCTGATGAAGATGGGAATAGATCCTGACAACCATAAGCTTCATAATCATCATCATGTTTCTTCTTCTAATGCTGCTAATGCTGCAACTTCAGTTGAAAAACCTAATAATAATATTTCAAACTTGAATCTTGACCTCACTATTGCTTTTGATCCTTCTTCTGCTGAGTCCTCCCACAGAAATAAAAATACTACTACTTCTAAGGACATGGATCAGAGTCAACCAGCAGCTACAACCCTTCCTCTATTGAACTAG | 594 | 0.4276 | MRKPCCDKEDTNKGAWSKQEDQKLIDYIQSHGEGCWRSLPKAAGLHRCGKSCRLRWINYLKPDIKRGNFAQDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRRKLMKMGIDPDNHKLHNHHHVSSSNAANAATSVEKPNNNISNLNLDLTIAFDPSSAESSHRNKNTTTSKDMDQSQPAATTLPLLN | 197 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi08g1197 | 197 | CDD | SANT | 15 | 60 | IPR001005 | - | |
| Mibi08g1197 | 197 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 8 | 60 | IPR017930 | - | |
| Mibi08g1197 | 197 | FunFam | MYB transcription factor | 67 | 128 | - | - | |
| Mibi08g1197 | 197 | CDD | SANT | 68 | 111 | IPR001005 | - | |
| Mibi08g1197 | 197 | FunFam | MYB-related transcription factor | 12 | 65 | - | - | |
| Mibi08g1197 | 197 | ProSiteProfiles | Myb-like domain profile. | 61 | 111 | IPR001005 | - | |
| Mibi08g1197 | 197 | SUPERFAMILY | Homeodomain-like | 11 | 107 | IPR009057 | - | |
| Mibi08g1197 | 197 | Pfam | Myb-like DNA-binding domain | 66 | 110 | IPR001005 | - | |
| Mibi08g1197 | 197 | Pfam | Myb-like DNA-binding domain | 13 | 60 | IPR001005 | - | |
| Mibi08g1197 | 197 | Gene3D | - | 68 | 133 | - | - | |
| Mibi08g1197 | 197 | Gene3D | - | 13 | 65 | - | - | |
| Mibi08g1197 | 197 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 1 | 178 | - | - | |
| Mibi08g1197 | 197 | ProSiteProfiles | Myb-like domain profile. | 8 | 60 | IPR001005 | - | |
| Mibi08g1197 | 197 | SMART | sant | 12 | 62 | IPR001005 | - | |
| Mibi08g1197 | 197 | SMART | sant | 65 | 113 | IPR001005 | - | |
| Mibi08g1197 | 197 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 61 | 115 | IPR017930 | - | |
| Mibi08g1197 | 197 | MobiDBLite | consensus disorder prediction | 130 | 151 | - | - | |
| Mibi08g1197 | 197 | MobiDBLite | consensus disorder prediction | 166 | 197 | - | - | |
| Mibi08g1197 | 197 | MobiDBLite | consensus disorder prediction | 133 | 151 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi08g1197 | Mibi-ChrMibi08 | 27313645 | 27314979 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi08g1197 | 2 | 185 | MYB Transcription Factor Family | AT4G09460 | 58.824 | 2.06e-76 | 227 |
Transcription factors information