Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1191 ATGGGGTTTTCCCAAGGAACCTGTACTGATTCTTGGGAGCCTTCAAACCCACAAAATGCCCTTGATAAAGCCACAGATCACTACTACGACTATAACAAGCTCAAATTCAGAAGCACTTGGAGAAAAATGGTGTGGATGATTGGGTTTTCCTGTATTCCCCTCCCTCGCCGGCGCCGCCGTAACGCCGGCGGCAAGATTAAGGGTCAGGACAAAAACACGGCGTGGCTACTGGCGGAGTCTGGTGGGTGTACGGCGGAGTCAACGAATGCTGACCCACAATCTGTTCACTCCTCATTCAGATTCAATATATGTTCTCAGGTTGAGCTTGAATCTCTAAAAATGAGTTCTTCCTCAGCTGCGACGGTGTTGATGGTGAATTTGGATAATGGGGTTAGTGAATCTCCAGCTCGGGATGTGAAATGGTGGAGAATAGATTCACTGAATAAAGGGATATTTCCAGGGACCAATTCTTTGATTAGATTTAACTACAGTGAAATCCTCTCTGCTACCCACAATTTCTCCCAAGGTAGAGTATTGGGAAGAGGGGCTTTGAGCTGTGTTTTCAGGGGCAAAATTGGACTTCTGAGGAGTGCTGTGGCAATTAAGAGATTGGACAAGGAAGACAGAGAGTGTGCAAAGTCTTTCTGTAGAGAATTGATGATTTCTAGCTCACTTCAAAACCCAAACATTGTTCCTCTTGTTGGGTTTTGTGCTGATCCAGAGGAGGGTTTGTTTCTGGTCTACAAATTTGTCTCAGGAGGCAGCTTAGAACACCACTTGCATGGGAAGAAGAAGAAGGGTGTAAAGGGAAATTCACCATTACCTTGGTCTGTGAGGTATGAAGTTGCTGTTGGGATTGCAGAAGCAATATCTTATCTGCATAATGGAACCAAAAGATGTGTTGTACACAGAGACATTAAGCCCTCTAACATTCTTCTTTCCTCTAGAAAGTCTCCCAAGCTATGTGATTTTGGATTAGCTACATGGACTTCAGCACCTTCAATTCATTTCCTCTGCAAAACTGTTAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTTCAACATGGGAAGGTGTCGGACAAGACTGATGTTTACGCTTTTGGAGTGGTATTATTGGAACTCATAACTGGTAGAAAGCCGATTGAAGCCAAAAGACCACCAGGAGAAGAAAATTTGGTCTCATGGGCTAAACCATTGCTTCAGAAAGGGAAGGAAGCCATTGAAGAGCTGCTTGATCCTCAACTCAATTGCTCCTTAAAATCCTCGAATCAGATGTGTCAAATGCTTGAAGCTGCAACGGCTTGTGTCACGAACGAAGAATCTCGAAGGCCCGGCATTAAAGAGATAATCTCAATACTGAAAGGTGAAGGACTAATCTTGTCCAAAAGGAGGAAGTCTTCATTTGGTGCTAATGGATCTGTAATTGATTCTTATCCTCAGTTACTAGATACAAACACAGATATCAAAGGTCACTTGGCTTTGGCTATGTTAGGTGTTTCAGAGTTTGAGGATGATGATTACCTCTTTGGTCGTTAA 1539 0.4334 MGFSQGTCTDSWEPSNPQNALDKATDHYYDYNKLKFRSTWRKMVWMIGFSCIPLPRRRRRNAGGKIKGQDKNTAWLLAESGGCTAESTNADPQSVHSSFRFNICSQVELESLKMSSSSAATVLMVNLDNGVSESPARDVKWWRIDSLNKGIFPGTNSLIRFNYSEILSATHNFSQGRVLGRGALSCVFRGKIGLLRSAVAIKRLDKEDRECAKSFCRELMISSSLQNPNIVPLVGFCADPEEGLFLVYKFVSGGSLEHHLHGKKKKGVKGNSPLPWSVRYEVAVGIAEAISYLHNGTKRCVVHRDIKPSNILLSSRKSPKLCDFGLATWTSAPSIHFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKRPPGEENLVSWAKPLLQKGKEAIEELLDPQLNCSLKSSNQMCQMLEAATACVTNEESRRPGIKEIISILKGEGLILSKRRKSSFGANGSVIDSYPQLLDTNTDIKGHLALAMLGVSEFEDDDYLFGR 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1191 512 FunFam probable serine/threonine-protein kinase PBL7 134 250 - -
Mibi08g1191 512 Gene3D Phosphorylase Kinase; domain 1 157 250 - -
Mibi08g1191 512 SMART serkin_6 173 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1191 512 PANTHER OS08G0249100 PROTEIN 141 468 - -
Mibi08g1191 512 SUPERFAMILY Protein kinase-like (PK-like) 160 457 IPR011009 -
Mibi08g1191 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Mibi08g1191 512 ProSiteProfiles Protein kinase domain profile. 173 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1191 512 Pfam Protein kinase domain 174 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1191 512 FunFam Putative receptor-like serine/threonine-protein kinase 251 469 - -
Mibi08g1191 512 Gene3D Transferase(Phosphotransferase) domain 1 251 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1191 Mibi-ChrMibi08 27188911 27192028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1191 160 458 Trihelix Transcription Factor Family AT1G70460 41.391 1.05e-68 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mibi08g1191 Pkinase 4.7e-44 CL0016