Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1185 ATGGAGAAGATCAACTCAGAGTTGAGGAAAGGTACATGGACACCAGAGGAAGACAATCTTCTCAGAACCTGCGTTCAAAAGTATGGCGAAGGAAAGTGGCATCTCGTTCCTCAAAGAGCTGGTTTGAAGAGATGCAGGAAAAGCTGCAGAATGAGATGGCTGAATTATCTGAAACCCAACATTAGACGAGGAAGCTTCACCGACGACGAGGTTGATATGATTCACAGATGGTCATTGATAGCGGGAAGGCTACCGGGAAGAACAGCGAATGACGTGAAGAACTTCTGGCACACTAACATGCGCCATAATAATAAGGAGGAAGAAGAAGAAGAAAATGAGAGGAAGAAAGTAAAAATAAAAGAAGAGGAAAAAGGGAAGGCTATAAAAGGAGGTCATGTAGTGATAAAACCTCAGCCTCATACATTTTCTCAGAATTCGCCATGGCTGAGGAAGAATAATAATAATTGTAATAAACTTGTTCCTGCACGTGCTAGTACTAGTGCTTCTACCACTAGTACAGGTGGGCGTAGTCATTTTGCACAGCCAAGTCCTCTTCCTGCTCCTGCCGATTCTGGAAAGAGTGAGTCAGACGAGTGGTGGGAGAGTTTACTGAACATGGAGGGAGATGATGATATTGAGGGGCAATATGGGAATTTTACTATGATGAAGCTCTTTGACCAGCATTTTCTCCAAATGTAG 699 0.4335 MEKINSELRKGTWTPEEDNLLRTCVQKYGEGKWHLVPQRAGLKRCRKSCRMRWLNYLKPNIRRGSFTDDEVDMIHRWSLIAGRLPGRTANDVKNFWHTNMRHNNKEEEEEENERKKVKIKEEEKGKAIKGGHVVIKPQPHTFSQNSPWLRKNNNNCNKLVPARASTSASTTSTGGRSHFAQPSPLPAPADSGKSESDEWWESLLNMEGDDDIEGQYGNFTMMKLFDQHFLQM 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1185 232 MobiDBLite consensus disorder prediction 162 179 - -
Mibi08g1185 232 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Mibi08g1185 232 ProSiteProfiles Myb-like domain profile. 58 100 IPR001005 -
Mibi08g1185 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 61 IPR017930 -
Mibi08g1185 232 SMART sant 9 59 IPR001005 -
Mibi08g1185 232 SMART sant 62 102 IPR001005 -
Mibi08g1185 232 SUPERFAMILY Homeodomain-like 10 101 IPR009057 -
Mibi08g1185 232 Gene3D - 70 129 - -
Mibi08g1185 232 MobiDBLite consensus disorder prediction 162 200 - -
Mibi08g1185 232 Pfam Myb-like DNA-binding domain 76 98 IPR001005 -
Mibi08g1185 232 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Mibi08g1185 232 Gene3D - 10 62 - -
Mibi08g1185 232 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 180 - -
Mibi08g1185 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 104 IPR017930 -
Mibi08g1185 232 CDD SANT 12 57 IPR001005 -
Mibi08g1185 232 Coils Coil 102 125 - -
Mibi08g1185 232 FunFam Myb transcription factor 10 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1185 Mibi-ChrMibi08 27102127 27103629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1185 8 204 MYB Transcription Factor Family AT1G66370 43.925 2.07e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi08g1185 Myb_DNA-binding 5.5e-16 CL0123