Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1184 ATGGATGCAGAAGGTTCATGGCAGAGGACTTGGACACGGAAGCGAGAATGGAAGGAAGGAACACCAACAATGGTGTGGACAACTGTTAGGCTACAAACCTTCACATTAATGGATGATAACACAGGTGGGTTGAGGAAAGGTACTTGGACCCAAGAGGAAGACAATCTTCTCAGAGATTGCGTTCAAAAGTACGGTGAAGGAAAATGGCATCTTGCTCCTCAAAGAGCTGGTTTGAAGAGATGCAGGAAAAGTTGCAGAATGAGATGGTTGAATTATTTGAAACCCAACATCAACCGAAAAAGCTTCTCCGAGGATGAGGTTGATATGATTCTGAGGTTTCATAAACTTCTGGGAAACAGATGGTCATTGATAGCTGGCAGGCTACCAGGAAGAACAGCAAACGACGTGAAGAACTTCTGGCACACCAACATGCGAAATAGGAAGAAGAAAGAAGAAAGCCAAGAGATGGTTGAAGCAAAAGAAGAGGTGGAGAATAATAATGTTGCAGAGAAGAAGAGAGAAGTAGAACATCATCACGTAGTGATAAAACCTCAGCCTCATACTTTCTCTAAGAATTCACCATGGCTGAGGAGGAAAAGCAGTGATAATAATGATAATAGTAATAAGGTTGATGTTTCTGCAAGTAGCTCCGGTGATATCAAAGAGGGTATTATTGCAGAGCCATGTGATGAGTCAGAGGAATGGTGGGAGAGTTTACTGAGCAAAGAAGTAGATGAGGGGCAATTTGGGGATTTCACTATGGAGTGTTTGGACCATGACTTTCCAAAATTGAAAGGTCTATTTGGGGAAGGTCACAATTGTTGGGGTTCATATATATAA 840 0.4214 MDAEGSWQRTWTRKREWKEGTPTMVWTTVRLQTFTLMDDNTGGLRKGTWTQEEDNLLRDCVQKYGEGKWHLAPQRAGLKRCRKSCRMRWLNYLKPNINRKSFSEDEVDMILRFHKLLGNRWSLIAGRLPGRTANDVKNFWHTNMRNRKKKEESQEMVEAKEEVENNNVAEKKREVEHHHVVIKPQPHTFSKNSPWLRRKSSDNNDNSNKVDVSASSSGDIKEGIIAEPCDESEEWWESLLSKEVDEGQFGDFTMECLDHDFPKLKGLFGEGHNCWGSYI 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1184 279 MobiDBLite consensus disorder prediction 181 217 - -
Mibi08g1184 279 Pfam Myb-like DNA-binding domain 99 142 IPR001005 -
Mibi08g1184 279 Pfam Myb-like DNA-binding domain 46 93 IPR001005 -
Mibi08g1184 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 98 148 IPR017930 -
Mibi08g1184 279 SUPERFAMILY Homeodomain-like 44 140 IPR009057 -
Mibi08g1184 279 MobiDBLite consensus disorder prediction 186 215 - -
Mibi08g1184 279 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 42 219 - -
Mibi08g1184 279 Gene3D - 37 99 - -
Mibi08g1184 279 ProSiteProfiles Myb-like domain profile. 94 144 IPR001005 -
Mibi08g1184 279 SMART sant 98 146 IPR001005 -
Mibi08g1184 279 SMART sant 45 95 IPR001005 -
Mibi08g1184 279 FunFam Myb transcription factor 46 98 - -
Mibi08g1184 279 Coils Coil 146 169 - -
Mibi08g1184 279 Gene3D - 101 176 - -
Mibi08g1184 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 97 IPR017930 -
Mibi08g1184 279 CDD SANT 48 93 IPR001005 -
Mibi08g1184 279 CDD SANT 101 144 IPR001005 -
Mibi08g1184 279 ProSiteProfiles Myb-like domain profile. 41 93 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1184 Mibi-ChrMibi08 27072983 27075202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1184 37 244 MYB Transcription Factor Family AT1G66370 46.903 4.09e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi08g1184 Myb_DNA-binding 6.5e-14 CL0123