Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi08g1183 | ATGGTGTTCTTGACAAATCGCCTGCAAATTCATGTCAAGAGAGGCTATGATCTTGCTTTCATGAATTCCCGAAGCTGCAATTCTTACGTTGTCATCAAAATGGGCCACCAGAAATGGAAGAGTGAAGTGATGAAGAATAACGCGAATCCTGAGTGGAATGAAAAGTTGACCTTCCATCTGGAAAATCCACATCTCCCTCTTCAACTTATTGTGTACAACAAGGGAAAATTTAGTCTTGATGAAAAAATGGGGGAGGCTGAGTTTTCAATTAATCCATTTCTTGATGCTGTGATGAGGCAATCGGAAGCCCTTAGGGAAGGAGATATCATCACGACAATTGAACCGAACCGCCAAAACTGTATGGCTGAGGAGAGTCGAATTGTGTGGAAAGATGGCAATGTAGTTCAAAACATGTTTATCAGACTCAACAATGTCCATTCTGGGGAAGTAGAGATTCAATTGTCAATGGAGTACTGGTGGGGTCTCCTCCAAATTCATGTCTATAGAGGCCTCAATCTTGCCATCAGAGATGTTGTTGGTCGGAGCAGTGATCCTTATCTTGTCCTCAAAACGGGCAAGCAGCAAGTGAAGACTAGAGTGGTGAAGCAGAGTGTAAATCCAGAGTGGGATGAAGAACTGACTTTATACATTCCAGATCCTCCTCTTCCAGTCCAACTTTTTGTGTATGACAGAGACATATTCAGTTCTGATGACAGAATGGGGGAAGCTGAATTAGACATTAATCCAATTGTTGAAGCTTTGAAAATGACGTTGGAAGATGGCCTCCCTGATGGAACCACCCTTAGAACAATACCGCCGAACCGGCAAAACATGCTCGCAGAAAGGAGCCAAATTGTGTGGGAAAACGGCCAAGTGGTTCAGAACATGGTTCTTAGACTCAAACATGTTGAATCTGGTGAAGTGGAACTCCAATTGCGCTTAAAGCTTCCCAATTCCTGA | 960 | 0.4323 | MVFLTNRLQIHVKRGYDLAFMNSRSCNSYVVIKMGHQKWKSEVMKNNANPEWNEKLTFHLENPHLPLQLIVYNKGKFSLDEKMGEAEFSINPFLDAVMRQSEALREGDIITTIEPNRQNCMAEESRIVWKDGNVVQNMFIRLNNVHSGEVEIQLSMEYWWGLLQIHVYRGLNLAIRDVVGRSSDPYLVLKTGKQQVKTRVVKQSVNPEWDEELTLYIPDPPLPVQLFVYDRDIFSSDDRMGEAELDINPIVEALKMTLEDGLPDGTTLRTIPPNRQNMLAERSQIVWENGQVVQNMVLRLKHVESGEVELQLRLKLPNS | 319 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi08g1183 | 319 | Pfam | C2 domain | 162 | 252 | IPR000008 | - | |
| Mibi08g1183 | 319 | Pfam | C2 domain | 7 | 92 | IPR000008 | - | |
| Mibi08g1183 | 319 | Gene3D | C2 domain | 3 | 114 | IPR035892 | - | |
| Mibi08g1183 | 319 | Gene3D | C2 domain | 143 | 315 | IPR035892 | - | |
| Mibi08g1183 | 319 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 143 | 252 | IPR035892 | - | |
| Mibi08g1183 | 319 | ProSiteProfiles | C2 domain profile. | 1 | 104 | IPR000008 | - | |
| Mibi08g1183 | 319 | CDD | C2_ArfGAP | 161 | 306 | - | - | |
| Mibi08g1183 | 319 | ProSiteProfiles | C2 domain profile. | 146 | 260 | IPR000008 | - | |
| Mibi08g1183 | 319 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 161 | 313 | IPR044562 | - | |
| Mibi08g1183 | 319 | SMART | C2_3c | 162 | 259 | IPR000008 | - | |
| Mibi08g1183 | 319 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
| Mibi08g1183 | 319 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 7 | 93 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi08g1183 | Mibi-ChrMibi08 | 27062535 | 27067130 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi08g1183 | 195 | 312 | C2H2 Transcription Factor Family | AT1G70790 | 51.261 | 9.18e-37 | 127 |