Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1182 ATGCAGAAATTGAAGACAAGAGTGGTGGAGAAGAATACTAATCCTGAGTGGAATGAAGATTTGGCTTTATCCGTTTCAGATCCACATCTCCCGGTTCAAATTTTTGTGTATGACAGGGACACATTTTTTTATGACAAAATGGGGGAGGCTGAGTTTGACATTAGGCCATTTCTTGAATCTGTGAAGACAAGGTTTGAAGAAGGCATCCAGGATGGAACAATCATCAGAACAGTCGAGTCGAACCGGTTAAACTGTCTTGCAGAGGAGATCCAAATTGTGTGGAAAGATGGGAAAGTTGTTCAAAACATGTGTCTTAAGCTGAAGAATGTGGAACGTGGGGAAGTGGAGCTCCAATTATCAATGGAGACCATATTGGGTCTGCTCAGAATTAGAGTCCAGAGAGGTGTGAATCTTGCTATCAGAGATATCTTCAGCAGAAGCAGTGATCCTTGTGTTGTCTTCCAAATGGGCAAGCAGAAATTGAAGACTCGAGTAGTGAAAAGGAGTCTGAATCCTGAATGGAATGAAGAGTTAATTTTATATATTTCAGATCCTCCTCTCCTAATCCAACTTTTTGTGTATGACAGAGACATGAGTTTTGATGACAAGCTGGGGGAGGCAGAGTTGGACATTAATCCTTTTGTTGAAGCCGTGATGAGGCAGCGGTCTGGTGTTCCGGTGCATGGAGGAGGTTACCTATAG 702 0.4259 MQKLKTRVVEKNTNPEWNEDLALSVSDPHLPVQIFVYDRDTFFYDKMGEAEFDIRPFLESVKTRFEEGIQDGTIIRTVESNRLNCLAEEIQIVWKDGKVVQNMCLKLKNVERGEVELQLSMETILGLLRIRVQRGVNLAIRDIFSRSSDPCVVFQMGKQKLKTRVVKRSLNPEWNEELILYISDPPLLIQLFVYDRDMSFDDKLGEAELDINPFVEAVMRQRSGVPVHGGGYL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1182 233 ProSiteProfiles C2 domain profile. 111 226 IPR000008 -
Mibi08g1182 233 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 2 120 IPR044562 -
Mibi08g1182 233 Gene3D C2 domain 122 225 IPR035892 -
Mibi08g1182 233 Gene3D C2 domain 1 121 IPR035892 -
Mibi08g1182 233 ProSiteProfiles C2 domain profile. 1 68 IPR000008 -
Mibi08g1182 233 SMART C2_3c 1 66 IPR000008 -
Mibi08g1182 233 SMART C2_3c 127 223 IPR000008 -
Mibi08g1182 233 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 108 215 IPR035892 -
Mibi08g1182 233 Pfam C2 domain 126 213 IPR000008 -
Mibi08g1182 233 Pfam C2 domain 2 59 IPR000008 -
Mibi08g1182 233 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 63 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1182 Mibi-ChrMibi08 27047423 27050413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1182 160 217 C2H2 Transcription Factor Family AT1G70790 54.237 4.23e-13 63.2