Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1181 ATGGAATGCACTGAATTAATTGGTTGTAAACGTTTTGTGTTGAAAGAAATGGTGTTCTTGACGAATCGCCTGCAAATTCATGTCAAGAGAGGCGATCATCTTGCTTTCAGGAATTCCCGAAGCTGCAATTCTTACGTTGTCATCAAAATGGGCCACCAGAAATGGAAGAGTGGAGTAATGAAGAATAACGCGAATCCTGAGTGGAATGAAGAGTTGATCTTCCATCTGGAAAATCCACATCTCCCTCTTCAACTTATTGTGTACAACAAGGGAAAATTTAGTCTTGATGAAAAAATGGGGGAGGCTGAGTTTTCAATAAGTCCATTTCTTGATGCTGTGATGAGGCAATCGGAAGCCCTTAGGGAAGGAGATATCATCACGACAATAGAACCGAACCGCCAAAACTGTATGGCTGAGGAGAGTCGAATTGTGTGGAAAGATGGCAATGTGGTTCAAAACATGGTTATCAGACTCAACAATGTCCATTCTGGGGAAGTAGAGATTCAATTGTCAATGGAGTACTGGTGGGGTCTCCTCCAAATTCATGTCTATAGAGGCCTCAATCTTGCCATCAGAGATGGTGTCCGTCGGAGCAGCGATCCTTATCTTGTCCTCAAAATGGGCAAACAGCAAGTGAAGACTAGAGTGGTGAAGCAGAGTGTAAATCCAGAGTGGGATGAAGAACTGACTTTATACATTCCAGATCCTCCTCTTCCAGTCCAACTTTTTGTGTATGACAGAGACACATTCAGTTCTGACGACAGAATGGGGGAAGCTGAGTTAGACATTAATCCAATTGTTGAAGCTTTGAAAATGACGTTGGAAGATGGCATCCCTGATAGAACCACCCTTAGAACAATACTGCCGAACCGGCAAAACCGGCTCGCAGAAAGGAGCCAAATTGTGTGGGAAAACGGCCAAATGGTTCAGAACATGGTTCTTAGACTCAAACATGTTGAATCTGGTGAAGTGGAACTCCAATTGCACTTAAAGCTTCCCAATTCCTGA 1008 0.4335 MECTELIGCKRFVLKEMVFLTNRLQIHVKRGDHLAFRNSRSCNSYVVIKMGHQKWKSGVMKNNANPEWNEELIFHLENPHLPLQLIVYNKGKFSLDEKMGEAEFSISPFLDAVMRQSEALREGDIITTIEPNRQNCMAEESRIVWKDGNVVQNMVIRLNNVHSGEVEIQLSMEYWWGLLQIHVYRGLNLAIRDGVRRSSDPYLVLKMGKQQVKTRVVKQSVNPEWDEELTLYIPDPPLPVQLFVYDRDTFSSDDRMGEAELDINPIVEALKMTLEDGIPDRTTLRTILPNRQNRLAERSQIVWENGQMVQNMVLRLKHVESGEVELQLHLKLPNS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1181 335 Pfam C2 domain 178 268 IPR000008 -
Mibi08g1181 335 Pfam C2 domain 23 109 IPR000008 -
Mibi08g1181 335 SMART C2_3c 178 275 IPR000008 -
Mibi08g1181 335 SMART C2_3c 23 118 IPR000008 -
Mibi08g1181 335 Gene3D C2 domain 13 130 IPR035892 -
Mibi08g1181 335 Gene3D C2 domain 150 331 IPR035892 -
Mibi08g1181 335 CDD C2_ArfGAP 177 322 - -
Mibi08g1181 335 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 176 329 IPR044562 -
Mibi08g1181 335 ProSiteProfiles C2 domain profile. 162 276 IPR000008 -
Mibi08g1181 335 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 159 267 IPR035892 -
Mibi08g1181 335 ProSiteProfiles C2 domain profile. 2 120 IPR000008 -
Mibi08g1181 335 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 23 109 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1181 Mibi-ChrMibi08 27035813 27041492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1181 211 329 C2H2 Transcription Factor Family AT1G70790 49.167 1.37e-34 122