Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1180 ATGGAACGGCTCATAGTTCATGTCAAGCGAGGTCTCAATCTTGCTATTAGAGACTCCTCAAGCAGCGATCCTTACCTTATCATCAAAATGGGCCACCAGAAATTGAAGACTAGAGTGGTGGAGAAGAATACTAATCCTGAGTGGAATGAAGATTTGGCTTTATCCATTTCAGATCCACATCTCCCAGTTCAACTTTTTGTGTATGACAGGGACACATTTTTTGATGACAAAATGGGGGAGGCTGAGTTTGACATTAGGCCATTTCTTGAATCTGTGAAGACAAGGTTTGAAGAAGGCATCCAGGATGGATCAATCATCAGAACAGTCGAGCCGAACCGGCGAAACTGTCTTGCAGAGGAGAGCCAAATTGTGTGGAAAGATGGGAAAGTTGTTCAAAACATGTGTCTTAGGCTGAAGAATGTGGAATGTGGGGAAGTGGAGCTCCAATTATCAATGGAGACCATATTGGGTCTGCTCAGAATTAGAGTCCAGAGAGGTGTGAATCTTGCTATCAGAGATATCTTCAGCAGAAGCAGTGATCCTTGTGTTGTCTTCCAAATGGGCAAGCAGAAATTGAAGACTCGAGTAGTGAAGAGGAGTCTGAATCCTGAATGGAATGAAGAGCTAACTTTATATATTTCAGATCCTCCTCTCCCAATCCAACTTTTTGTGTATGACAGAGACATGAGTTTTGATGACAAGCTGGGGGAGGCAGAGTTGGACATTAATCCTTTTGTTGAAGCCGTGATGAGGCAGCGGTCTGGTGTTCCGGTGCATGGAGGAGGTATCATTAAAAGAATTAAACCCAACCGGGAAAACTGTTTGGCTGAAGAGAGCCAAATAGTGTGGAAAGATGGGCAAATATTTCAAGACATGGCTGTTAGGCTTAGAAATGTGGAGTCTGGGGAAGTGGAGCTGCAATTGCATTGGATTCATATTCCTCCCTCCAGCACTACTACTCTCTAG 966 0.4389 MERLIVHVKRGLNLAIRDSSSSDPYLIIKMGHQKLKTRVVEKNTNPEWNEDLALSISDPHLPVQLFVYDRDTFFDDKMGEAEFDIRPFLESVKTRFEEGIQDGSIIRTVEPNRRNCLAEESQIVWKDGKVVQNMCLRLKNVECGEVELQLSMETILGLLRIRVQRGVNLAIRDIFSRSSDPCVVFQMGKQKLKTRVVKRSLNPEWNEELTLYISDPPLPIQLFVYDRDMSFDDKLGEAELDINPFVEAVMRQRSGVPVHGGGIIKRIKPNRENCLAEESQIVWKDGQIFQDMAVRLRNVESGEVELQLHWIHIPPSSTTTL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1180 321 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 94 IPR035892 -
Mibi08g1180 321 Gene3D C2 domain 1 108 IPR035892 -
Mibi08g1180 321 Gene3D C2 domain 138 314 IPR035892 -
Mibi08g1180 321 CDD C2_ArfGAP 4 144 - -
Mibi08g1180 321 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 139 245 IPR035892 -
Mibi08g1180 321 ProSiteProfiles C2 domain profile. 142 257 IPR000008 -
Mibi08g1180 321 ProSiteProfiles C2 domain profile. 1 99 IPR000008 -
Mibi08g1180 321 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 151 IPR044562 -
Mibi08g1180 321 Pfam C2 domain 3 90 IPR000008 -
Mibi08g1180 321 Pfam C2 domain 157 244 IPR000008 -
Mibi08g1180 321 SMART C2_3c 158 254 IPR000008 -
Mibi08g1180 321 SMART C2_3c 3 97 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1180 Mibi-ChrMibi08 27031524 27035617 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1180 191 314 C2H2 Transcription Factor Family AT1G70790 53.600 1.37e-38 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1180 08 27031524 27035617 Mibi08g1180 08 27031524 27035617 ECH
Mibi12g0143 12 2767978 2769045 Mibi08g1180 08 27031524 27035617 ECH