Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1179 ATGGAGAATTTGATGGGTTTGCTTAGAATTCATGTCCAGAGAGGTGTGAATCTCGCTGTTAGAGATGTTGTAAGCAGTGATCCTTATGTTGTCATCAAAATGGGCAAGCAGAAATTGAAGACTCGAGTGATAAACCAGGATATCAATCCCGAGTGGAATGATGATTTGACCTTATCTATTTCAGATCCTCGTCTCCCAGTCCATCTGCATGTGTATGACAAAGACAAATTCAGTTTTGATGACAAAATGGGAGAGGCTGATTTTGACATTATTCCCTTTGTTGAAGCTGTGAAGATGCGGTTGAAAGACCTCCCGGACGGAACCATTGTCACAAAAATTAGTCCAAACCGACAAAACTGTCTGGCTGAAGAGAGCCAAATCCTGTGGAAAGATGGCAAAGTTGTTCAAAACATGGTTCTGAGACTGAAAAATGTTGAGTCTGGGGAAGTGGAGCTCCAATTGCAATGGATTGACATTCCTGGTTCCAGGGGCCTGTAG 498 0.4277 MENLMGLLRIHVQRGVNLAVRDVVSSDPYVVIKMGKQKLKTRVINQDINPEWNDDLTLSISDPRLPVHLHVYDKDKFSFDDKMGEADFDIIPFVEAVKMRLKDLPDGTIVTKISPNRQNCLAEESQILWKDGKVVQNMVLRLKNVESGEVELQLQWIDIPGSRGL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1179 165 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Mibi08g1179 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 157 IPR035892 -
Mibi08g1179 165 Gene3D C2 domain 4 160 IPR035892 -
Mibi08g1179 165 SMART C2_3c 7 102 IPR000008 -
Mibi08g1179 165 CDD C2_ArfGAP 6 148 - -
Mibi08g1179 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
Mibi08g1179 165 Pfam C2 domain 6 90 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1179 Mibi-ChrMibi08 27019383 27021416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1179 38 165 C2H2 Transcription Factor Family AT1G70790 59.231 8.47e-52 160