Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1173 ATGAAGAGAGAATACCCAGATAACGGTACTATTGGTGGTGGTGGTGGTGGTGGTAGTAGTGGTGGTTTGAAATCTGAATGTTCATCAATGTCAGGTGGGAAGATGAAGATGTGGGAGGATGAGCTCGAATCTTCTGGCGGTATGGATGAATTACTAGCAGCTATGGGCTACAAGGTTCGCTCATCAGACATGGCAGATGTAGCCCAGAAACTCGAGAAACTCGAGATGGCTTTGGCTACTTCTCAGGAAGATGGCATATCTCACCTTGCTTCAGATACTGTTCACTATGACCCCACCGATATCCATGGCTGGGTTCAAAGTATGCTCACCGAACTTCACACTTCACCTAATCACCATCTCGATCCGTCAACACTGTTAACCAATCACCAAATCGACGACCCTATCGGTAATTTCTCGAATCCTCACCAACAGATTCCAAATCTCACCACCGTTTACCACGACGATTCCGAGTACGACCTCAGAGCAATCCCAGGCAAAGCGGTTTTCCCACAAACCAAAACGACAACAGATAGTGAAAATCAAAACAGCCATAAGCGATTGCGAACAAGCGAATCGTCTCCGGAGCAAGCGCGTCCGGTGGTTCTCGTTGACTCGCAGGAGAACGGAGTGCGTCTAGTACACGCGCTTATGGCATGTGCGGAGGCGGTTCAGCAGAACAATCTGAAGCTAGCGGAAGCGCTCGTGGAACACGTGGGAAGGCTTGCGGTTTCTCAAGCCGGAGCGATGAGGAAGGTAGCTTCATGCTTCGCTCAAGCTTTAGCTCACAGGATTTACGGAATCTCACAGCCTTCTATAGATTCCGCCTTCTCTGATTTACTCTATATGCATTTCTATGAATCCTGTCCTTACCTGAAATTCGCTCATTTCACTGCGAATCAAGCCATACTTGAAGCTTTCGCTACTGCTGATAAGGTTCATGTCATTGATTTCGGCCTCAAGCAAGGGATGCAATGGCCGGCATTAATGCAAGCCCTAGCATTACGACCTGGTGGCCCTCCGAGTTTCAGACTCACCGGAATCGGACCTCCACAGAAAGATAACTCAGATCCTCTTCAACTAGTAGGATTCAAATTAGCGCAATTAGCGAAGACAATCGGAGTTCAATTCGAATTCCGTGGCTATGTCTGTAACAGTTTGGTAGATCTCGATCCTTCGTTAATCGAGATCCGAACAGGAGAATCCGTCGCCGTTAACTCCGTTTTCGAGCTCCACAGCCTTCTTTCCCGACCAGGCGCCGTTGACAAGGTGTTAAACACCGTGAAGGCGGTGCATCCGAAGATCGTGACGGTTGTAGAGCAAGAAGCGAACCACAACGAACCGGTTTTCTTGGACCGGTTCACGGAGGCGCTACACTATTACTCGACGATGTTTGACTCGCTGGAGGGGTCGGCGGCGGGGAGTGAGGATGTGGTGATGACGGAGGTTTATTTGGGGAGGCAGATATGCAACGTGGTGGCTTGTGATGGGTTGGAGCGAGTTGAGAGGCATGAATCGCTGAGTCAGTGGAGGGGACGGTTGGGATCGGCCCGGTTCGAACCGGTTCACCTCGGATCGAACGCGTTCAAGCAAGCGAGCATGTTGTTGTCTGTGTTCGCAGGAGGGGATGGTTACAGGGTTGAAGAGAATAATGGTTGCCTTCTTCTTGGGTGGCATACTCGCCCACTCATCGCCACGTCAGCTTGGAGAATTCCGGCCGGCGAGGTTGAGCTTCAGTGA 1737 0.5049 MKREYPDNGTIGGGGGGGSSGGLKSECSSMSGGKMKMWEDELESSGGMDELLAAMGYKVRSSDMADVAQKLEKLEMALATSQEDGISHLASDTVHYDPTDIHGWVQSMLTELHTSPNHHLDPSTLLTNHQIDDPIGNFSNPHQQIPNLTTVYHDDSEYDLRAIPGKAVFPQTKTTTDSENQNSHKRLRTSESSPEQARPVVLVDSQENGVRLVHALMACAEAVQQNNLKLAEALVEHVGRLAVSQAGAMRKVASCFAQALAHRIYGISQPSIDSAFSDLLYMHFYESCPYLKFAHFTANQAILEAFATADKVHVIDFGLKQGMQWPALMQALALRPGGPPSFRLTGIGPPQKDNSDPLQLVGFKLAQLAKTIGVQFEFRGYVCNSLVDLDPSLIEIRTGESVAVNSVFELHSLLSRPGAVDKVLNTVKAVHPKIVTVVEQEANHNEPVFLDRFTEALHYYSTMFDSLEGSAAGSEDVVMTEVYLGRQICNVVACDGLERVERHESLSQWRGRLGSARFEPVHLGSNAFKQASMLLSVFAGGDGYRVEENNGCLLLGWHTRPLIATSAWRIPAGEVELQ 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1173 578 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 180 565 IPR005202 -
Mibi08g1173 578 ProSiteProfiles GRAS family profile. 203 569 IPR005202 -
Mibi08g1173 578 SMART DELLA_2 49 122 - -
Mibi08g1173 578 Pfam GRAS domain family 212 569 IPR005202 -
Mibi08g1173 578 Coils Coil 64 84 - -
Mibi08g1173 578 MobiDBLite consensus disorder prediction 1 32 - -
Mibi08g1173 578 MobiDBLite consensus disorder prediction 169 198 - -
Mibi08g1173 578 FunFam DELLA protein GAI 47 112 - -
Mibi08g1173 578 Pfam Transcriptional regulator DELLA protein N terminal 49 116 IPR021914 -
Mibi08g1173 578 Gene3D - 47 112 IPR038088 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1173 Mibi-ChrMibi08 26915961 26917697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1173 34 570 GRAS Transcription Factor Family AT2G01570 60.069 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mibi08g1173 GRAS 2.6e-132 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1173 08 26915961 26917697 Mibi08g1173 08 26915961 26917697 CCT
Mibi08g1173 08 26915961 26917697 Mibi08g1173 08 26915961 26917697 ECH
Mibi08g1173 08 26915961 26917697 Mibi07g0145 07 2089142 2091481 ECH