Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1163 ATGGACATCACATCTAAACCTTCATCAAATCGTCCATGGCTCTGGGTGGTTGAAGCCCTAGCGAGCTGTGCAAAAATAGACAAATCTACTTTACAAGCCCCTGTAGGGCGCTATGATTTTGGTGATAACACAAGGGAATTGGTTTCTAGGAGATCTTTGGAGGGCTTGTTTTGTTCTGCTGGTGGATTGAACTTTGATGCCTCCTCTAGCCTGGATTCAAGATTTGAGTCTGGCGTTTCAAGAAGTTGTAAAGATATCCTCCATCAAATAGTCTACGAGATACCATTGTCAAGTCCAAGAATGGCTGGAGTAGAGATTTTGAAACGGGATGTATACCCATTTATGACACAAAAAAGAGCCAGCCCCATGAAATTGGAATTGGAGCAGGTGCTGAAAGAATCAGTCATTGAAGGTACTCATCCATGCGCTGATATCTTGAAAGCAAGGAGTGGGTTGACATTTCAGAATCAGGTTTACCGATTGCCTGCAAATGATGGCCAATGCAATGATCTATCTAAAACTGATAATGAGAGTGGCGCGGGAGCTAAGCAGAAACCCACATCGAAAGAACATTCTCACACAAGTATTGATGATCCAGAAAATGCTCAGCACAAGAGTTTTGAGTCTCAACCTGAACAGGAAATAGGCATTCACCTGAAAGAACCCAATGCTGTATATTTAAATCCCACACGGCAGTCGGTTTCTTGTCATGAAGATATTGTTGATTCTTTCAATGGCCTTGGAGCAGAGCACTCTGAAATGATTGATTTTGCAGCTGAAAGGCATGAGTTATTTAGCTCTTTCTACCTATCTAGTCATGATATTTCTGCAAATACTGAGTGGAGAGGCCAAAATCTTTGTATGAAGTGTAATGAAGGCGGTCAATTACTGGTTTGTAAAACAACGACCTGCCAATTGAAGGTTCATGAAAGCTGCTTGAGTAAGTCTGCTCAATTTGATGGAAAGAGTAACTTTTTGTGCCCATTTTGTGCATATTCATGTGCTGTTTCAGAATATCTTGAAGCAAAGAAGAAGATTTTTGTTGCAAGGGAAGAACTATGTATCTTCCTTGGTGGGGGTATAGAGGATCAGGCAATGGAACTCCTTGAAGTTTATAGAAAAGAAAATAACTCTTCAATAAAGGATAAGGATGAAACTATTCTTGTCAAAGACAATGGAAATGACCAGGTATTAGGAACAGCAAGAGAAGACAATCAAGTACATGTAAATGAGGTCAATAATATTCAGTTTGAAAGAAGTCGGCAGCTGGTAGAGACTCCAACTGCATGTGATAATGTTCCCCCGTTATGCAGAGTAAAGGGAATTGTAAACAATGGGACAGAAACAGATTCAGTTTTAAATGGAGGAGAAGAAACAGGTAACAATCCAAAAAATTTATGTGTTAAAAGAGTTGAGGAAAGCCTAGCAGCGGGGGACCAAGTAACTGCTGGTGGTAGCTTATTTGGTGATGTTCCCTCTGTTAAGCAAAACAACATGGGAGAAGAAAATAAGCAGGAATTGATTGGAGAATATAGCACTGATCGCACGGAATTGCCAGCTTGTGCACATTATAATGAAGAGAACGATTCTGAAGATGGCAGTGACCAGCATATGAATTTTAGATACTCCATGAGATCCCGAAAGTATAAAACACAACGCGAGCCACTACTAATCCCTTTATTAAGAAAACGACAAAATGTTCCATGGACAGCTGAGGAGGAAGCCATACTAATGGAAGGAGTGCGGAAGTTTGGAGCGAGTGACCAGCAGAGAATGCCGTGGAAGCAGATCTGGGAATTTGGTTCTCATGTTTTTCTAAGTGAACGGAGACCGGTAGATTTGAAAGATAAATGGAAGAATATATGCAAAGCAAAACGGAGATTAAAATGA 1890 0.4063 MDITSKPSSNRPWLWVVEALASCAKIDKSTLQAPVGRYDFGDNTRELVSRRSLEGLFCSAGGLNFDASSSLDSRFESGVSRSCKDILHQIVYEIPLSSPRMAGVEILKRDVYPFMTQKRASPMKLELEQVLKESVIEGTHPCADILKARSGLTFQNQVYRLPANDGQCNDLSKTDNESGAGAKQKPTSKEHSHTSIDDPENAQHKSFESQPEQEIGIHLKEPNAVYLNPTRQSVSCHEDIVDSFNGLGAEHSEMIDFAAERHELFSSFYLSSHDISANTEWRGQNLCMKCNEGGQLLVCKTTTCQLKVHESCLSKSAQFDGKSNFLCPFCAYSCAVSEYLEAKKKIFVAREELCIFLGGGIEDQAMELLEVYRKENNSSIKDKDETILVKDNGNDQVLGTAREDNQVHVNEVNNIQFERSRQLVETPTACDNVPPLCRVKGIVNNGTETDSVLNGGEETGNNPKNLCVKRVEESLAAGDQVTAGGSLFGDVPSVKQNNMGEENKQELIGEYSTDRTELPACAHYNEENDSEDGSDQHMNFRYSMRSRKYKTQREPLLIPLLRKRQNVPWTAEEEAILMEGVRKFGASDQQRMPWKQIWEFGSHVFLSERRPVDLKDKWKNICKAKRRLK 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1163 629 MobiDBLite consensus disorder prediction 184 207 - -
Mibi08g1163 629 ProSiteProfiles Zinc finger PHD-type profile. 284 333 IPR019787 -
Mibi08g1163 629 Pfam Myb-like DNA-binding domain 568 620 IPR001005 -
Mibi08g1163 629 ProSiteProfiles Myb-like domain profile. 568 622 IPR001005 -
Mibi08g1163 629 ProSitePatterns Zinc finger PHD-type signature. 287 330 IPR019786 -
Mibi08g1163 629 Gene3D - 561 625 - -
Mibi08g1163 629 CDD SANT_TRF 567 623 - -
Mibi08g1163 629 MobiDBLite consensus disorder prediction 165 212 - -
Mibi08g1163 629 SUPERFAMILY Homeodomain-like 565 623 IPR009057 -
Mibi08g1163 629 SMART PHD_3 286 331 IPR001965 -
Mibi08g1163 629 SUPERFAMILY FYVE/PHD zinc finger 276 333 IPR011011 -
Mibi08g1163 629 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 12 625 - -
Mibi08g1163 629 MobiDBLite consensus disorder prediction 165 183 - -
Mibi08g1163 629 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 274 357 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1163 Mibi-ChrMibi08 26792382 26795953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1163 510 622 Single Myb Histone (SMH) Gene Family AT1G15720 36.066 6.62e-07 50.1