Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1152 ATGGGAAGGCAACCATGCTGTGACAAAGTTGGACTGAAGAAGGGCCCTTGGACTGCTGATGAGGACAAGAAACTCATCAACTTCATCCTCACCAATGGCCAATGTTGCTGGAGAACTGTCCCTAAGCTTGCAGGGCTATTGAGATGTGGGAAAAGTTGCAGGCTTAGATGGACCAATTACCTCAGACCAGATTTGAAGAGAGGTCTTCTTTCTGAATATGAAGAGAAAATGGTGATTGATCTCCACGCCCAACTTGGCAACAGATGGTCCAAAATTGCGTCTCATCTTCCTGGAAGAACTGATAATGAGATCAAGAACCATTGGAACACACACATCAAGAAGAAGCTCAAGAAAATGGAGATTGATCCTGTCACTCACAAGCCTCTCTCTGAACAACAACAACAACAACAACAACAACAAATCCACAATAATACTCCATCACAGATTAATCAAGTTCAGATACAACAACAACAACAACAACAACAACAACAAAATCAGCAACCTTTGACTAGTGCTTTCAAGATGGACCAAAATGGAGAACCAGAAAAGGCAGACACATCGTATGAGTCATCATCAACCTTAACTGAATCGAAAGAGGAAGACAAGGTTGAAACTCAACCATTTGATGACATCATCATGAACAGTTTCTGTACTGATGAGGTTCCATTGATTGAACCTGATGAGATTCTAATGCCCTCTGGTCCTACCCCTTCTTCGTCTTCTTCGTCCTCGTCTTCTTCATCTTCTTCAAATTCTTCCGACTTTCTCAGAGACTTGGAGCTCCCAGAATTCGAGTGGGCTTGTAATTACAGTGACGACAACAACAACAACAACAACAGTGTTATGGGATTGTGGGGTGATGATGATTTTATGAGCGGGTGGGATTTGCTTTTGAATGATGATGGTGATGTAGACAGGAAGATGGCAGATTTTGATTCTGCGATCAAACAATGTCCAAGAATGGTGGTGGATCAAGAATCTTGGGCGGATGGCTTGTTTTGA 1002 0.4251 MGRQPCCDKVGLKKGPWTADEDKKLINFILTNGQCCWRTVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMEIDPVTHKPLSEQQQQQQQQQIHNNTPSQINQVQIQQQQQQQQQQNQQPLTSAFKMDQNGEPEKADTSYESSSTLTESKEEDKVETQPFDDIIMNSFCTDEVPLIEPDEILMPSGPTPSSSSSSSSSSSSSNSSDFLRDLELPEFEWACNYSDDNNNNNNSVMGLWGDDDFMSGWDLLLNDDGDVDRKMADFDSAIKQCPRMVVDQESWADGLF 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1152 333 MobiDBLite consensus disorder prediction 233 254 - -
Mibi08g1152 333 MobiDBLite consensus disorder prediction 126 207 - -
Mibi08g1152 333 MobiDBLite consensus disorder prediction 127 174 - -
Mibi08g1152 333 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi08g1152 333 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi08g1152 333 Gene3D - 11 67 - -
Mibi08g1152 333 FunFam MYB transcription factor 11 67 - -
Mibi08g1152 333 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 236 - -
Mibi08g1152 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi08g1152 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi08g1152 333 CDD SANT 74 112 IPR001005 -
Mibi08g1152 333 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi08g1152 333 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Mibi08g1152 333 CDD SANT 16 61 IPR001005 -
Mibi08g1152 333 FunFam Myb transcription factor 71 133 - -
Mibi08g1152 333 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi08g1152 333 Gene3D - 71 116 - -
Mibi08g1152 333 SMART sant 66 114 IPR001005 -
Mibi08g1152 333 SMART sant 13 63 IPR001005 -
Mibi08g1152 333 MobiDBLite consensus disorder prediction 227 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1152 Mibi-ChrMibi08 26689792 26691114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1152 1 301 MYB Transcription Factor Family AT1G66230 56.592 6.73e-99 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi08g1152 Myb_DNA-binding 5.9e-12 CL0123