Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1148 ATGAAGTCTCCTCTGTTTCCCCTTATCTTCTTAATTCCTTGTTTGTTCACCGTTGTTTCCTCAGATCTAGCTTCTGATAAGGCCGTTTTGGTTTCTCTTAGCAGTGCCGTTGGTGGCCGTTCTCTTCTATGGAATCTCTCTCAGTCAAGTCCTTGTAATTGGACTGGCGTTTTCTGTGGGAACAACACTGTTACTTCTTTACGCCTTCCTGCTATGGGCCTCTCTGGGAGGCTTCCTTTGGGAATTGGCAATCTCACTCAGCTTCAGACTCTTTCTCTTCGATTTAACGCTCTCTCTGGCCCAATTCCTCAGGATTTCGCTAACCTTGTTAACCTGAGGAATCTTTACTTGCAGGGGAATTTCTTCACTGGGGAAATCCCTGATTTCCTTTTTGGTATGCAGAATTTGGTTCGCTTGAATTTGGGTAAAAACAATTTCAGTGGTGAGATATCTCCTAAGTTTAATAATCTCACTAGGTTGGGTACCCTTCTGTTGAATGATAATGAGTTCACTGGGTCTATTCCTGACCTTAGTGCTCCTCCTCTTGATCAGTTTAATGTGTCGTCGAATCGGCTTAATGGGTCTATTCCAGTGAAGTTTTCACATTTAGATGCGAGTGCTTTTTCTGGGAATTTGTTTCTTTGTGGGAAACCCTTGCAGGGATGTGCTGGAACTGAGGTTGAAATTAAGAACAACAACAAGAAGAAGAAGTTATCTGGTGGGGCAATTGCAGGAATTGTGATTGGTTCAGTGGTTGGGCTTCTGTTGATTTTGCTTCTTCTGTTCTTCTTGTGCGGGAAGAGGAGCAGTGAAGAGAAGGATTCGAGGGATGTGACACAGGGAAAGGGTGGTGAGGTTGAGATTCCTCAAGAGAAGACAACCAGAGATGTTGAGAATTCTGGAGCAAGTTATGCGGCAACAGCAAGAGGTGGTGATGGGAGGACTGGTAGGAGTAAAAGATTGGTGTTTTTTGGTAATGTCAGCAAAGTGTTTGATCTTGAGGATTTACTAAGGGCGTCAGCAGAAGTTCTTGGGAAGGGAACCTTTGGGACTACGTATAAGGCTACTTTGGAGATGGGGGTGGTGGTGGCAGTGAAGAGGTTGAAGGATGTACCTGCTTCAGAGAATGAATTCAGAGAGAAAATTGAACAAGTGGGGAAGATGGTTCATGATAACTTAGTCCCACTTAGAGCTTACTATTATAGCAATGAAGAGAAGCTTCTTGCCTATGATTACATGCCCATGGGAAGCTTATCTGCCCTTTTACATGCTAATAATGGAGCTGGCAGAACTCCACTAAACTGGGAAACAAGGTCCCGCATTGCCCTTGGTGCTGCCCATGGGATTGCATACCTACACTCACATGGCCCATCTGCCTCCCATGGAAATATTAAGTCATCAAACATCCTTCTCACCAAATCTTATGAAGCTCGTGTTTCTGACTTTGGCCTTGCTCATCTTGCACTACCAACTTCAACACCCAACCGAGTTTCTGGTTACCGAGCCCCAGAGGTAACGGATGCTCGCAAAGTATCCCAAAAAGCAGATGTCTACAGCTTTGGTATAATGCTCTTGGAGCTGCTCACTGGGAAAGCTCCAACACATTCCTCTTTGAATGAAGAAGGGGTGGACCTCCCAAGATGGGTCCAATCTGTTGTTCAAGAGGAGTGGAACACTGAGGTTTTTGACATGGAGCTTCTCAGATACCAGAATGTTGAGGAGGAGATGGTCAAGCTCTTGCAGCTTGCGCTTGAATGTACTGAACAGTATCCTGACAATCGACCCTCCATGGATGTGGTGGCGAGCAGAATCGAGGAGATTTGTCATGCTACTTTAGAGAAAGAGGAAGAGAAAATTCAGTCACTGACAGATCCAGATAGTGGATACTCCCCACCTTGA 1899 0.4513 MKSPLFPLIFLIPCLFTVVSSDLASDKAVLVSLSSAVGGRSLLWNLSQSSPCNWTGVFCGNNTVTSLRLPAMGLSGRLPLGIGNLTQLQTLSLRFNALSGPIPQDFANLVNLRNLYLQGNFFTGEIPDFLFGMQNLVRLNLGKNNFSGEISPKFNNLTRLGTLLLNDNEFTGSIPDLSAPPLDQFNVSSNRLNGSIPVKFSHLDASAFSGNLFLCGKPLQGCAGTEVEIKNNNKKKKLSGGAIAGIVIGSVVGLLLILLLLFFLCGKRSSEEKDSRDVTQGKGGEVEIPQEKTTRDVENSGASYAATARGGDGRTGRSKRLVFFGNVSKVFDLEDLLRASAEVLGKGTFGTTYKATLEMGVVVAVKRLKDVPASENEFREKIEQVGKMVHDNLVPLRAYYYSNEEKLLAYDYMPMGSLSALLHANNGAGRTPLNWETRSRIALGAAHGIAYLHSHGPSASHGNIKSSNILLTKSYEARVSDFGLAHLALPTSTPNRVSGYRAPEVTDARKVSQKADVYSFGIMLLELLTGKAPTHSSLNEEGVDLPRWVQSVVQEEWNTEVFDMELLRYQNVEEEMVKLLQLALECTEQYPDNRPSMDVVASRIEEICHATLEKEEEKIQSLTDPDSGYSPP 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1148 632 Gene3D Ribonuclease Inhibitor 179 226 IPR032675 -
Mibi08g1148 632 Coils Coil 569 589 - -
Mibi08g1148 632 Pfam Leucine rich repeat N-terminal domain 24 59 IPR013210 -
Mibi08g1148 632 SUPERFAMILY L domain-like 44 221 - -
Mibi08g1148 632 Gene3D Phosphorylase Kinase; domain 1 310 412 - -
Mibi08g1148 632 SUPERFAMILY Protein kinase-like (PK-like) 342 603 IPR011009 -
Mibi08g1148 632 FunFam Probable inactive receptor kinase RLK902 23 178 - -
Mibi08g1148 632 MobiDBLite consensus disorder prediction 274 311 - -
Mibi08g1148 632 PANTHER OS05G0588300 PROTEIN 8 609 - -
Mibi08g1148 632 CDD STKc_IRAK 344 607 - -
Mibi08g1148 632 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Mibi08g1148 632 Gene3D Ribonuclease Inhibitor 24 178 IPR032675 -
Mibi08g1148 632 ProSiteProfiles Protein kinase domain profile. 338 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1148 632 FunFam pollen receptor-like kinase 1 308 412 - -
Mibi08g1148 632 FunFam Probable inactive receptor kinase At1g48480 413 615 - -
Mibi08g1148 632 Pfam Protein kinase domain 341 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1148 632 Gene3D Transferase(Phosphotransferase) domain 1 413 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1148 Mibi-ChrMibi08 26601471 26604136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1148 20 607 Receptor kinase-like Gene Family AT1G48480 58.862 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi08g1148 Pkinase 8.4e-37 CL0016