Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1135 ATGCTCCCTACCCGTCACATTGATACTACTATTAACTCTTCTTCTTCGCTAATCGCACATAGGAAAGCAATGAGGAAGCTCAAGTTTCATGAGAAGAAGCTATTGAAGAAGGTTAATTTCTTAGAGTGGAAGAGAGAAGGAGGTCACAGGGAAAATCATGTTATGCAACGCTATCATATTACTGGACGTGATGATTACAAGAAATATTCAAGTCTGTGCCGGATGGTGCAGAAGTTAGTGAATATGGTGAAGCAAATGGACCCGAAAGATCCATTTCGGATTGAGATGACTGATAAGCTCTTAGAAAAGCTGTACAATATTGGTGTGATTCCAACCAGGCAAAGTATTACACTTTGTGAACGTTTAACAGTGTCATCCTTTTGTAGGCGAAGGCTCGCAACTGTTTTGGTGCGATTAAAATTTGCTGAGTACTTGAAAGAAGCTGTGACATTCATTGAACAAGGGCATATAAGAGTTGGTCCAGAGACAGTCACTGACCCAGCGTTCCTGGTAACCAGAAACATGGAAGACTTCATCACATGGGTGGATTCATCCAAGATCAAGAGAAAGGTTCTACTGTACAATGACCAATTGGATGACTATGATATAATGAACTGA 618 0.4061 MLPTRHIDTTINSSSSLIAHRKAMRKLKFHEKKLLKKVNFLEWKREGGHRENHVMQRYHITGRDDYKKYSSLCRMVQKLVNMVKQMDPKDPFRIEMTDKLLEKLYNIGVIPTRQSITLCERLTVSSFCRRRLATVLVRLKFAEYLKEAVTFIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLLYNDQLDDYDIMN 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1135 205 Pfam S4 domain 130 176 IPR002942 GO:0003723
Mibi08g1135 205 PANTHER 30S 40S RIBOSOMAL PROTEIN 28 190 IPR022801 GO:0003735|GO:0015935|GO:0019843
Mibi08g1135 205 SMART Ribosomal_S4_2 26 129 IPR001912 GO:0019843
Mibi08g1135 205 ProSiteProfiles S4 RNA-binding domain profile. 130 196 - -
Mibi08g1135 205 SMART s4_6 130 197 IPR002942 GO:0003723
Mibi08g1135 205 FunFam U3 small nucleolar ribonucleoprotein IMP3 130 202 - -
Mibi08g1135 205 Gene3D - 130 203 IPR036986 GO:0003723
Mibi08g1135 205 CDD S4 130 195 - -
Mibi08g1135 205 Pfam Ribosomal protein S4/S9 N-terminal domain 26 128 IPR001912 GO:0019843
Mibi08g1135 205 SUPERFAMILY Alpha-L RNA-binding motif 49 194 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1135 86 171 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 34.483 6.15e-09 52.0