Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1124 ATGTCTCCAATTTCAAAGCAGTTTTCAGCATACAGCCAAGAAGTCATGAGACCTACAAACTTGGATCTTGAAGTGGAAGCTTCTGCAGAAAATGAATCTGAAATCAGCAGCCAGGTTGCTTCCAACATATTCATTCATGAAATATCTGCAGGTCCTTCTAGTGACAGCCTCAACAATGCATCAGACAACACAAACACCATAGGATTTCAACCAAGTAATGCGGATCCTCTCTCACTTGACTTAACTCTCAGCTTCAATAACAACGAGCTGGGCCCCGCAGGAGACTCAGTGGGACTCTCATTCTCAAGCACCAGTGAGAGTAGCAATGAACCTGCTTCTCAAACCACATCAGCCACCATCCAAAGAGTGTTCTCTTGCAACTACTGCCAGCGCAAATTCTTCAGCTCGCAGGCGCTTGGTGGCCACCAGAATGCACACAAGAGGGAGAGAACACTTGCAAAGAGAGCTATGAGGATGGGGTTTTTCTCTGATAGGTATGCAAGTTTAGCATCCCTCCCTCTTCATGGCTCTTTCAGGTCCTTGGGAATAAAAGCACACTCCTCACTTCACCATGGCTTTTCACCATCAATGGTGAGGCCTTATGAGATTAAAAGCAATTCGAGATTTGATCAAGGGTATGCTGGCGTGCCTGTGTTCATGGAGGATGATGAGGCAGAACTGCTATGGCCTGGTAGTTTCCGTCAGGTTGGAGAGGTTAGCGATAATGATAATCATGATCATCGTCATCATCATCAGAGGTTCATGGTCACTGGAAGTTCAAATTTGAGTTTTGCAGAAGTGAATCCAGAAGTACAACTTGAGCTAGAGGACTCAACACCAGATTTAACATTGAAACTTTGA 861 0.4506 MSPISKQFSAYSQEVMRPTNLDLEVEASAENESEISSQVASNIFIHEISAGPSSDSLNNASDNTNTIGFQPSNADPLSLDLTLSFNNNELGPAGDSVGLSFSSTSESSNEPASQTTSATIQRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGFFSDRYASLASLPLHGSFRSLGIKAHSSLHHGFSPSMVRPYEIKSNSRFDQGYAGVPVFMEDDEAELLWPGSFRQVGEVSDNDNHDHRHHHQRFMVTGSSNLSFAEVNPEVQLELEDSTPDLTLKL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1124 286 SUPERFAMILY beta-beta-alpha zinc fingers 121 151 IPR036236 -
Mibi08g1124 286 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 53 213 IPR044246 GO:0009788
Mibi08g1124 286 MobiDBLite consensus disorder prediction 52 71 - -
Mibi08g1124 286 FunFam Zinc finger protein 2 101 170 - -
Mibi08g1124 286 ProSitePatterns Zinc finger C2H2 type domain signature. 126 146 IPR013087 -
Mibi08g1124 286 Gene3D Classic Zinc Finger 101 167 - -
Mibi08g1124 286 MobiDBLite consensus disorder prediction 96 116 - -
Mibi08g1124 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 124 151 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1124 Mibi-ChrMibi08 26146602 26149129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1124 106 286 C2H2 Transcription Factor Family AT1G66140 49.528 6.26e-50 164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1124 08 26146602 26149129 Mibi08g1124 08 26146602 26149129 CCT
Mibi08g1124 08 26146602 26149129 Mibi08g1124 08 26146602 26149129 ECH