Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1101 ATGAAAATAAAAATAAAAAAAGCGAAAAGAAAGAGACCCCGACAACCAAAGGCCACATCGCGAAGCGCCCTTTCGACGATAGCCACAAGATTGCATCTCCTTCTCGAGATTTCGACGGAGAAAAATTTTCCTCCCAACGATAAGAGTCTGTTTGGTATGGATCAAAATGATGTAACCAGATCTCACACTATTCCAGTAGGAAATGGAGTATCTTTGAGCTCTAGACTACATTCTGCTGCACGGGTTCATTTAAATGATCAATTTTCTTTTGGGAATGACTATGCTCCAAAGGTAAGGAAACCGTATACCATCACAAAACAAAGAGAGAGATGGACAGATGAGGAGCACAAAAGTTTTCTTGAAGCTTTAAAGCTGTATGGCCGGGCATGGCGAAAGATTGAAGAACATGTTGGCACAAAGACTACGGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGGTTCTTCGTGATCCTTGTGGGGACAATACAAACTTGATGGAGTCCATTGAAATTCCACCCCCACGCCCAAAACGAAAGCCTACACATCCTTACCCTCGTAAGCTGGTGGAGCTCCCTAAGAAAGAAGCTTCCATACACAAACAGCTAATGATGTCTAATTCTCTGAAATCATCAGATTTTGACCAAGAAAACCAATCTCCCAAGTCAGTGTTATCTGCAGTTGGTTCAGACACCCCTGGTTCCTCTGATTCAGACACACCAAATGGAAGCTTGTCCTCAGTTTCATCCATGAGTGCTGTTCATACCAACAACTTTGTAGTTGCTGAACCTGAAAACCTACAATTGGAGGAGGATGGGTGTCTACCATTGACTGGACTAAGTGTCGATCCAACTGTTGACAAGCAACCCCTTATGAAGCTTGAACATCTCCAGAAAGAAAGCATATCTACCAAGGAAGATGCTTCGGAAGAATCATCTGCTCGGAGTCTGAAGCTTTTTGGGATGACTTTTTTGGTAACAGATAACTGCGGGCCATCCTCTCCAACAATGGAAGCATGCAAGTTGATTCACTCGAAATTTTTGCCGGTGAAATGTGATGCGAATAGTCTGCATAATGGAACACATGGTGCTACCGATAACATGCAGCTTGAGAGTGGAAATTCTGGGCTTGCAGAAGGTCCTTCTGTAGCTTTTGTTCCATGTTGGAGTATTCCCCACATTAGATCACTGCACAATGAGATGCCTGAAGGAAAACAACTAGACTCCAATCTAAGGGAAGTTGAACATGTAGAAGTTATAAAAGAAGGATCTTTGACCAATCCAAACACCACCTCTTCTAATATGGAAGCCAAAAGAGATACTAAAGCTATATTTGATCTGAAGAGGTGTGGGAAAGGGTTTGTGCCATACAAGAGGTGCATTACAGAGAGGGAAAAGCAGGCCTCATCAATTACCTTAATAGGAGAGTAG 1434 0.4254 MKIKIKKAKRKRPRQPKATSRSALSTIATRLHLLLEISTEKNFPPNDKSLFGMDQNDVTRSHTIPVGNGVSLSSRLHSAARVHLNDQFSFGNDYAPKVRKPYTITKQRERWTDEEHKSFLEALKLYGRAWRKIEEHVGTKTTVQIRSHAQKFFSKVLRDPCGDNTNLMESIEIPPPRPKRKPTHPYPRKLVELPKKEASIHKQLMMSNSLKSSDFDQENQSPKSVLSAVGSDTPGSSDSDTPNGSLSSVSSMSAVHTNNFVVAEPENLQLEEDGCLPLTGLSVDPTVDKQPLMKLEHLQKESISTKEDASEESSARSLKLFGMTFLVTDNCGPSSPTMEACKLIHSKFLPVKCDANSLHNGTHGATDNMQLESGNSGLAEGPSVAFVPCWSIPHIRSLHNEMPEGKQLDSNLREVEHVEVIKEGSLTNPNTTSSNMEAKRDTKAIFDLKRCGKGFVPYKRCITEREKQASSITLIGE 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1101 477 PANTHER SWI/SNF COMPLEX-RELATED 24 354 - -
Mibi08g1101 477 ProSiteProfiles Myb-like domain profile. 103 153 IPR001005 -
Mibi08g1101 477 SUPERFAMILY Homeodomain-like 102 155 IPR009057 -
Mibi08g1101 477 MobiDBLite consensus disorder prediction 212 250 - -
Mibi08g1101 477 MobiDBLite consensus disorder prediction 1 22 - -
Mibi08g1101 477 Pfam Myb-like DNA-binding domain 108 151 IPR001005 -
Mibi08g1101 477 ProSiteProfiles SANT domain profile. 106 157 IPR017884 -
Mibi08g1101 477 MobiDBLite consensus disorder prediction 167 195 - -
Mibi08g1101 477 SMART sant 107 155 IPR001005 -
Mibi08g1101 477 MobiDBLite consensus disorder prediction 1 17 - -
Mibi08g1101 477 Gene3D - 110 156 - -
Mibi08g1101 477 CDD SANT 110 153 IPR001005 -
Mibi08g1101 477 FunFam protein REVEILLE 6 isoform X1 110 158 - -
Mibi08g1101 477 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 106 155 IPR006447 GO:0003677
Mibi08g1101 477 MobiDBLite consensus disorder prediction 174 195 - -
Mibi08g1101 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 103 157 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1101 Mibi-ChrMibi08 25725974 25729888 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi08g1101 Myb_DNA-binding 7.2e-13 CL0123