Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1094 ATGGCACCAGTTTCATTTCCTCCAGGATTCAGATTCCACCCAACAGATGAAGAGCTGGTTGCATATTATCTCAAGAGAAAGATTAATGGCCTCAAGATAGAGTTAGAGATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAATCGCTGTTACCAGGGAAAGACTTGGAGTGGTATTTCTTCAGTCCACGAGACAGGAAATATCCGAATGGATCAAGAACAAATAGAGCTACAAGGTGTGGGTATTGGAAGGCAACAGGGAAGGATAGAAAAGTAAATTCACAGAGCAGAGCAGTGGGAATGAAGAAAACCCTAGTTTATTATAGAGGAAGAGCCCCTCATGGATCTCGTACTGATTGGGTGATGCATGAATATCGTCTTCATGAGCGTGAATGTCAACCTGCTTCTTCTGCCATGCAGGAGGCATATTCCCTATGTCGTGTGTTCAAGAAGAGTGCAGTGATAATCCCAAAGGTAGAAGAAGAGTACGTGATGAGGAGCAGTCATAATAATGGGAATTATCATAATCATAATCTTCATCAACATCATCATCAGTATCAGCAGCAGCAGATGGGTAGTGATCAGACCTCATCTACCATTATCAATAATAATGAGCTTAATTACTCTGAAGGAAGAGGTGAAGATCACTTGGACAGCTCAAATAATTACTTGATGATGCCTCTCCACCATCAATCACCCTACGTGCACCACCCGAATATTGGGACAAACTTCAACAACAGTGTGAATAGTAATAATAGTTGGTCACACTTCTTGGCTGATGATCCTTCTTTGTTCAGCCTTCCAACTACTTCTTCATTTTCCAACTATGCTGCCATGTCCTATCCTCCCTCCAAGGTGGACATAGCTTTAGAATGTGCAAGGATGCAGCATAGGTTCAGTATGCCTCCATTGGAGGTGGAGGACTTCCCTCAAGTTGGGATTTCTGAACTGAAGAATATGCCACAACAACCTGATCATCATTCTGGTGCCATTATTCATGGAAGCAGAACTACTGACACAACAACAGATATTTTGCAGGAGATTCTATCAGTAGCTCATGCTTCCCAAGAACTCATTAATCAGAATTCAAACTATTCACCCCTCACATGGGGCGGCGGAAACAGCCATGAAAACTATGCTCCTCACGAAGAAGATGATGACGACTTCACTTTCATGGTTGAAAGAGGAAATGGTGGTGATGAGAATTATAACTACAACCAGCAGGTGGTGAGTGACTTGAGTTCAATGATCAGAGGCATTAATAATGAGACTACTACTACCACATGGGAAGATCAGAACACAGCTAGGTCAATAGAGATTTCAGATCTGGATGATGAGTTCAAGGCAGAGAGGATGGTGGAAAACTTGAGATGGGTTGGTATGTCAAGCAAAAATATGGACAAGAGCTTTATGGAAGATCAAAAGATTGTTCCCATTGAGGATATTACTAATTTCCAAATAAACAAGGAAGACAATGAAGTACAAGCAGAGTGTGTGCAGCACCAAAGCAACGACATCAACGACTTCTCATTAGGATATATCAATTATGATGAGCCAAATGAGAACTTCATAGATGAAGGTACCCCCATGGATGACTATACTAGCTCTCCAAGCTGCTTTGATGTTGTTGAGGAAGTAAAGGTCAGCCATGGAATGTTTGTGGCAACTCGCCAAGCAGCTGACACATTCTTTCATCAGATAGTCCCTTCACAAACCCTCAAGGTTCATCTCAACCCAATAATGGCAAATAACAATAATCTCTCAGTAGAAAATGCAGAAACAGAACAGACAGAAGAAACACTGATAATGGAGAAACAAGAGTCCTATGTCACAAAACTGAAAGACTATGTGATAGGAAAGCTAATAATGAAGCCTTCAAAGACTGCTAGTACAATTATGTTCATATTTGCATTCCTCTTGATGCATTGTGCTTCATATTTGGGGGAGCATGTACAAGTACTGAAACTAGATCCTCATGATGAAGATGTCAAGGAGAAATATTGCTCTAGTGCAAGCAGCAAGAAGAAATCCTCATGGGATGAGAAAGAAAGGGTTTGGTTTGTTGGTATCAAAAGTGGAGGAGGGTTTGGTGTGGTGTTGAAGAAGGTAGGGATTTTCCTTACAATTTCTTTAGCACTTTGCACCATGTGGGCTAACCACATCACAGTTGAATAA 2193 0.415 MAPVSFPPGFRFHPTDEELVAYYLKRKINGLKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATRCGYWKATGKDRKVNSQSRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRLHERECQPASSAMQEAYSLCRVFKKSAVIIPKVEEEYVMRSSHNNGNYHNHNLHQHHHQYQQQQMGSDQTSSTIINNNELNYSEGRGEDHLDSSNNYLMMPLHHQSPYVHHPNIGTNFNNSVNSNNSWSHFLADDPSLFSLPTTSSFSNYAAMSYPPSKVDIALECARMQHRFSMPPLEVEDFPQVGISELKNMPQQPDHHSGAIIHGSRTTDTTTDILQEILSVAHASQELINQNSNYSPLTWGGGNSHENYAPHEEDDDDFTFMVERGNGGDENYNYNQQVVSDLSSMIRGINNETTTTTWEDQNTARSIEISDLDDEFKAERMVENLRWVGMSSKNMDKSFMEDQKIVPIEDITNFQINKEDNEVQAECVQHQSNDINDFSLGYINYDEPNENFIDEGTPMDDYTSSPSCFDVVEEVKVSHGMFVATRQAADTFFHQIVPSQTLKVHLNPIMANNNNLSVENAETEQTEETLIMEKQESYVTKLKDYVIGKLIMKPSKTASTIMFIFAFLLMHCASYLGEHVQVLKLDPHDEDVKEKYCSSASSKKKSSWDEKERVWFVGIKSGGGFGVVLKKVGIFLTISLALCTMWANHITVE 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1094 730 FunFam Nac domain-containing protein 86 15 160 - -
Mibi08g1094 730 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Mibi08g1094 730 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Mibi08g1094 730 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Mibi08g1094 730 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 232 - -
Mibi08g1094 730 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1094 Mibi-ChrMibi08 25638966 25644401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1094 1 650 NAC Transcription Factor Family AT1G65910 44.060 3.49e-156 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi08g1094 NAM 4.2e-40 No_clan