Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1061 ATGCTTCAACCCAAAATCACTCTCCTTCCGTTATTATTTATCACTACCATCATATTCTGGTCATGTTGGTCCCTTGACGGCGTCATTTCTGACCCTCAAACCAATCTTCTAATCCGTAATTGCCTCCTATATAACAGAGATGAGTATGACACCAAGTCCTTCAATGATAGCGTAAGTGAAACGTTTCGTGACCTCACGTTTCAGGTGATGAACCAGAACAAGTTCTTCGCCACGGCGCAGAAAACCGACGGAAACCTCCCGGTTTACGCCATTTTTCAGTGCCGGAGCTACCTCTCCGCCACTGACTGCGCCGCCTGCTTTGTCCATGCCTCCGAGCAAATCCGCAACTGCTCGGCCGGGACTAACTTTGCTCGTGTCATCTATGACGGTTGCTTTCTTAGGTATGAGAGCACCAATATCCTTGAGCAGACAACTGGAATTTACAATACTGCGCCATGTGGAAATCAAAGTGTAGAATCAGACACTACTGCATTTTCTTCAGCTGCACAACGACTCCTAATGAATCTTCAGACAACAACACCCGGAATAACTGGTTACTCAGCAGCCGCAAAAATTCAAGTGCCTAATGATAATAATAATGGAGAAACTATTTATGCCTATGCTCAATGTACTGAAACTATCTCACAAAGTGGGTGTGAGGATTGCTTGAAGCAAGGGGTCAACAATGTGCAGACTTGTCTTCCCAATTCAGAGGGAAGGGCTTTTGATGCTGGGTGCTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATAACCAGACCATCCATATCATCACTTACCCCTTAGTCAAACAAGGTTCAAGCAAGAAGGGGGTCATTATTGGTGTACTTGTTGGAGTGGTGGCTTTTGTTTGGGTCCTCCTTACTCTACTGATCGCTTATAACAGACGACCAAAAAGGTGTGAGAGAATTCCCAGAGACATATCTGGATCAAGCAACTTGAAGGGCCCAGTTTATTATAATTACGGGGATTTAAAGTCTGCAACAAAAAATTTCAGTATAGAGAATAAACTTGGAGAAGGAGGATTCGGTGTTGTATATAAGGGCACCTTAAAGAATGGCAAAGTAGTTGCGGTCAAGAAATTAAATATACGACATCACTCCAAGAGAGTGGAGGAAGAATTTGAGAGTGAAGTGAGGCTTATAAGTAATGTTCATCATCGACATCTTGTTCGGCTTCTTGGATGTTGCAGTAAAGGCGATGAGAGAATACTTGTTTATGAATACATGAAAAATACAAGTTTGGACAGATTCTTATTTGGTAAAAAGAAGGGCTCACTTGGTTGGAAGCAACGATACGATATAATTTTAGGAACAGCAAAGGGTTTAGTTTATCTACATGAAGAGTATCATGTTCGTATCATACATAGAGATATAAAGACCAATAATATCCTCTTAGATGATGATCTACAACCTAGAATTTCTGATTTTGGCTTGGCAAGGTTTTTACCAGAGGAAAAAACTCATCTTAGCACAAAAGTCGCCGGAACATTAGGATATACAGCTCCAGAGTATGCAATTCATGGTCAATTATCAGAAAAGGCTGATGTCTATAGCTTTGGTGTTGTTATCCTAGAGATCATCAGTGGTCAAACAAACAATGAAATAAAAGTTGATGGTGAGGATGAAGGCGAATTCCTCCTTCGAAAGGCATGGAAACTATATGAAAGAGGTATCCACTTCGAGCTGATCGACAAAACCATGAACCCTAATGATTATGATGTAGAGGAAGTGAAGAAAATAATAGAAATCGGTTTTCTTTGCACCCAAGCTTATGCTGAATTAAGGCCACCAATGTCTGAAGTAGTTGTTTTGCTCCAAAAGAAGGGCCTATCAAAGAACATAAAACCCACAATGCCTATTTTGATTGAAGCTAATTAA 1902 0.4111 MLQPKITLLPLLFITTIIFWSCWSLDGVISDPQTNLLIRNCLLYNRDEYDTKSFNDSVSETFRDLTFQVMNQNKFFATAQKTDGNLPVYAIFQCRSYLSATDCAACFVHASEQIRNCSAGTNFARVIYDGCFLRYESTNILEQTTGIYNTAPCGNQSVESDTTAFSSAAQRLLMNLQTTTPGITGYSAAAKIQVPNDNNNGETIYAYAQCTETISQSGCEDCLKQGVNNVQTCLPNSEGRAFDAGCFMRYSTTSFFPDNQTIHIITYPLVKQGSSKKGVIIGVLVGVVAFVWVLLTLLIAYNRRPKRCERIPRDISGSSNLKGPVYYNYGDLKSATKNFSIENKLGEGGFGVVYKGTLKNGKVVAVKKLNIRHHSKRVEEEFESEVRLISNVHHRHLVRLLGCCSKGDERILVYEYMKNTSLDRFLFGKKKGSLGWKQRYDIILGTAKGLVYLHEEYHVRIIHRDIKTNNILLDDDLQPRISDFGLARFLPEEKTHLSTKVAGTLGYTAPEYAIHGQLSEKADVYSFGVVILEIISGQTNNEIKVDGEDEGEFLLRKAWKLYERGIHFELIDKTMNPNDYDVEEVKKIIEIGFLCTQAYAELRPPMSEVVVLLQKKGLSKNIKPTMPILIEAN 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1061 633 FunFam Cysteine-rich receptor-like protein kinase 2 417 621 - -
Mibi08g1061 633 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 629 - -
Mibi08g1061 633 ProSiteProfiles Protein kinase domain profile. 339 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1061 633 SMART serkin_6 339 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1061 633 Gene3D Transferase(Phosphotransferase) domain 1 417 624 - -
Mibi08g1061 633 Pfam Salt stress response/antifungal 48 137 IPR002902 -
Mibi08g1061 633 Pfam Salt stress response/antifungal 153 252 IPR002902 -
Mibi08g1061 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Mibi08g1061 633 Gene3D Phosphorylase Kinase; domain 1 308 416 - -
Mibi08g1061 633 ProSiteProfiles Gnk2-homologous domain profile. 147 255 IPR002902 -
Mibi08g1061 633 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Mibi08g1061 633 Gene3D - 147 255 IPR038408 -
Mibi08g1061 633 Gene3D - 37 139 IPR038408 -
Mibi08g1061 633 SUPERFAMILY Protein kinase-like (PK-like) 318 613 IPR011009 -
Mibi08g1061 633 CDD STKc_IRAK 345 615 - -
Mibi08g1061 633 FunFam Cysteine-rich receptor-like protein kinase 2 305 416 - -
Mibi08g1061 633 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Mibi08g1061 633 Pfam Protein kinase domain 340 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1061 633 FunFam Cysteine-rich receptor-like protein kinase 2 148 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1061 Mibi-ChrMibi08 25145280 25150688 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1061 1 616 Receptor kinase-like Gene Family AT1G70520 37.559 6.12e-125 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1061 Pkinase 5e-49 CL0016