Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1059 ATGAAAACCATAATTCGACCTTTTAACTATCTCCTTCATCCCTTATTCTTCTTATTCCTATTCTGGTCATGTTATACTCTAAACGTCGTCGTTTCAGACCCACAGACCAATCTTCTGTACGCCGCGTGCAGCCCATTCTATGAATTTGTCATCTCCAACTTCACCATCTTCAGTGAGAACCTAAACGCAACGTTTCGAGATCTTAGATCGAAAGTCAAAGACCAAAACATGTACTTTGCCACTTCACAGTCAGTAGGTGACCAGAACAACCCAGCTTCTTCTCTTTTTCAATGCAGAGAGTATCTCTCCATCCGCGACTGCGTCGCCTGCTTCGACGTCGCCGCCGTCCAAATACGCAATTGCTCCTCTGGGACCCACGGTGCTCGCGTCGTCTACGACGGTTGCTTTCTCAGGTACGAGATGAGCACTTTCTTCAGCGAGACAACATCGTTCAATGCTGTATCGTGTGGGAATCGAAGTTCAGGAGCAGAAGCCACCGAATTTACCTCAGCTGCCCAAAAATTGCTAACAGATCTGGAAACCACAACACCAACCATGTATGGCTTTTATGAAGCTATCAAGACCCAAGTGCCAAATAATGGCCCAACTATATATGCCTTTGCTCAATGTATTGGAACCATCACTTCAAGTGATTGCCTCAATTGCTTGAACGCTGGCTACAGCAATATGCAGACTTGTCTCCCCAATTCAGATGGTAGGGCTTATGCTGCTGGCTGCTTCATGAGATATTCCACCACTTCCTTCTTCCCTAATAATCAAACCATTGATACCATACCCTTGGCCAATAAACAAGGTGGGAGTAATAATAGGGGGGCTATTATTGGTGGTGTAGTTGGAGCTGTGGCAATTGTTATGGTTCTCCTTGGATTATTATTTGTTTGGATCAAACTACGTCGACCTAAAAAACCAAATAGTGTTCCTAGAGGTGACATACCTGGAGCTAGCAAGTTGAAAGCACCAGAAACTTACAATTATAGGGACTTGAAGTTGGCAACAAAAAATTTTAGTGAAGAAAATAAACTAGGACAAGGAGGATTCGGTACAGTATACAAGGGTACTTTGAAGAATGGGAAAGTAGTGGCAATCAAGAAATTAACTTTACGCAGCAACTCCAAGAGAGTGGAGGAACAATTTGAGAGTGAAGTGATTCTGATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTGGGTTGTTGCAGTAAAGGTGACGAGAGGATCCTTGTTTATGAATACATGAAAAACACTAGCCTTGACAAATTCTTATTTGGTAAAAGGAGAGGTTTTCTCACCTGGAAGCAGAGATATGACATTATTTTAGGAACAGCAAGGGGTTTGACTTATTTGCATGAGGAATTTCATGTTCGTATAATACATAGAGATATAAAGACGGCCAATATTCTTTTGGATGATGATTTTCAACCTAGAATTGCTGATTTTGGATTGGCTAGACTTTTACCTGAAGACCGATCTCATGTTAGTACAAGACTAGCCGGAACACTGGGATATACGGCACCTGAATATGCAATCCACGGCCAATTATCAGAAAAGGCGGATGTTTTTAGCTATGGTGTTGTGGTCTTAGAAATCATTAGTGGTAAAAGAAGTGAAGAATTGAAGATCCATGGTGATGTTGAAGGTGAATTCCTCCTACAAAAGGCTTGGAAACTATATGAGAAAGAAATGCACGTAGAGTTGGTGGACAAAACCTTAGACCCTAATGACTATGAACCAGAAGAAGTAAAGAAAGTCATAGAGATTGGTTTGCTTTGTACTCAAGCATTCGCTGATATGAGGCCAACAATGTCCGAAGTAGTTGTCTTGCTCCAAAACAAAGAGTTATCAGAGAAGATAAAACCCACCATGCCTCTCTTGATTGAAACTAATTAG 1911 0.4155 MKTIIRPFNYLLHPLFFLFLFWSCYTLNVVVSDPQTNLLYAACSPFYEFVISNFTIFSENLNATFRDLRSKVKDQNMYFATSQSVGDQNNPASSLFQCREYLSIRDCVACFDVAAVQIRNCSSGTHGARVVYDGCFLRYEMSTFFSETTSFNAVSCGNRSSGAEATEFTSAAQKLLTDLETTTPTMYGFYEAIKTQVPNNGPTIYAFAQCIGTITSSDCLNCLNAGYSNMQTCLPNSDGRAYAAGCFMRYSTTSFFPNNQTIDTIPLANKQGGSNNRGAIIGGVVGAVAIVMVLLGLLFVWIKLRRPKKPNSVPRGDIPGASKLKAPETYNYRDLKLATKNFSEENKLGQGGFGTVYKGTLKNGKVVAIKKLTLRSNSKRVEEQFESEVILISNVHHRNLVRLLGCCSKGDERILVYEYMKNTSLDKFLFGKRRGFLTWKQRYDIILGTARGLTYLHEEFHVRIIHRDIKTANILLDDDFQPRIADFGLARLLPEDRSHVSTRLAGTLGYTAPEYAIHGQLSEKADVFSYGVVVLEIISGKRSEELKIHGDVEGEFLLQKAWKLYEKEMHVELVDKTLDPNDYEPEEVKKVIEIGLLCTQAFADMRPTMSEVVVLLQNKELSEKIKPTMPLLIETN 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1059 636 Gene3D - 37 144 IPR038408 -
Mibi08g1059 636 Gene3D - 148 255 IPR038408 -
Mibi08g1059 636 Pfam Protein kinase domain 343 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1059 636 FunFam Cysteine-rich receptor-like protein kinase 2 311 419 - -
Mibi08g1059 636 CDD STKc_IRAK 348 618 - -
Mibi08g1059 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Mibi08g1059 636 ProSiteProfiles Gnk2-homologous domain profile. 150 255 IPR002902 -
Mibi08g1059 636 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Mibi08g1059 636 Gene3D Phosphorylase Kinase; domain 1 318 419 - -
Mibi08g1059 636 FunFam Cysteine-rich receptor-like protein kinase 2 151 255 - -
Mibi08g1059 636 SUPERFAMILY Protein kinase-like (PK-like) 326 616 IPR011009 -
Mibi08g1059 636 SMART serkin_6 342 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1059 636 Gene3D Transferase(Phosphotransferase) domain 1 420 629 - -
Mibi08g1059 636 ProSiteProfiles Gnk2-homologous domain profile. 36 144 IPR002902 -
Mibi08g1059 636 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 96 633 - -
Mibi08g1059 636 Pfam Salt stress response/antifungal 156 252 IPR002902 -
Mibi08g1059 636 Pfam Salt stress response/antifungal 55 140 IPR002902 -
Mibi08g1059 636 ProSiteProfiles Protein kinase domain profile. 342 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1059 636 FunFam Cysteine-rich receptor-like protein kinase 2 420 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1059 Mibi-ChrMibi08 25031146 25038548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1059 11 634 Receptor kinase-like Gene Family AT1G70520 37.382 2.13e-123 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1059 Pkinase 6.2e-50 CL0016