Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1058 ATGTTTCTATACCTACAACAAAAGCCCTACTTTGTCTTCTTTTTGGGTTTGATAATAATATGGTCATGTGGGACTCTTGACGGCGTCGTTTCTGACCCACAGACAACCTTTGTGAAGATAGGGTGCAGCCAATACAACGTGAGTGACTTGTCCATCTTCAGTGACAACTTAAACATAACACTAAGAGACCTTAGAGCACAAATCAGCAACCAAAGCAAGCACTTTGCTACGGCGCAGGCAGTGAAGGGTAACAATCCGGCGTATGGCCTTTTTCAGTGCAGAAACTATCTCTCCATCAAAGACTGCCTTGCTTGCTTCGACTACGCCGTCGTTCATATACGCAACTGCTCCGTCGGCGTCACCGGTGCCCGTATTTTCTATGAAGGTTGCACCCTCAGGTATGAGAGCAGTGGATTCTTCGATCAGAACTCAGACGCTGGAAACAACATAATATGTGGGAATCAGACTATAAAAAACACCACCGCACTTGCTTCAACTGTACAACAAGTTATAACGAATCTGGACATAGCAACCCCCAAAACTAAAGATTTCTATGCAGCTACTAAGACGCCAGTGCCTAACAGTAATGGCACAAACATTTATGCCTTTGCGCAATGTATTGAGTCAATCACATCAGCTGGGTGCCAGGATTGCCTCAATATTGCCTTAAGAAATTTTCAGATTTGTCTTCCCAACTCAAATGCTAAGACATATGATATTGGTTGTTTCATGAGATACTCCACTACAGCCTTCTTTGCTGATAATCAAACCATAAATATTTGGCCGTTCTTGAAACAAGGGGGAGGTTCAAGCAAGAAGAAGGCAATTATTGGTGGTGTGGTTGGAGGTGTATCTTTTCTTTTGATTCTCCTTGCATTATTTGTTTGGTACAAACGATCAACGTCGTCCAAGAGAATTCATAGAGGTGATATTCTAGGAGCAACTGAGTTGAAAGGCCCCATTAATTATAGGTACAAAGATCTTAAGAAGGCCACAAAAAATTTCAGTAAAGAAAATAAACTAGGAGAAGGAGGCTTCGGTGATGTATACAAGGGCACTTTAAAAAATGGGAAAGTAGTTGCTGTCAAGAAATTGGCTTTAGGGCAATCCAAACAGATGGAGAAAGATTTTGAGAGCGAAGTGAAGTTGATAAGTAATGTTCATCATCGGAATCTTGTTAGACTTCTTGGATGTTGCAGTAAAGGACAAGAGAGACTACTTGTCTATGAATACATGAGAAACAACAATGTTGGCACATTCTTGTTTGGAAAAAATAAAGGCTCCCTCAACTGGAAGCAACGTTATAATATAATTTTAGGCACAGCAAGGGGTTTGGCCTATTTGCACGAGGAATTTCATGTTTGTATCATTCATAGAGATATAAAGACCAGTAACATTTTGTTGGATGATGATCTCCAACCTAAAATTGCTGATTTTGGGCTGGCAAGGCTTCTCCCGCACGACTTATCTCATCTCAACACAAAATTTGCTGGAACAATGGGATACACAGCACCTGAGTATGCAATGCATGGACAACTATCAGAAAAGGCCGACACTTATAGCTATGGTGTTGTAGTCCTAGAAATCATAAGTGGACACAAGAGTGGTGAAACAAAGGATGATGTTGAAAGTGAATTTCTCCTTCAAAGAGCTTGGAAACTCTATGATAGAGGCGTGCACTTAGAGTTTGTGGACAATACCTTAGACCCTAATGAGTATGATCCAGAGGAAGTAAAGAAAATCATAGAGATTGCTTTGCTTTGCACTCAAGCATCTCCTGCAGCGAGGCCAACAATGTCTGAAATTGTAATTATGCTCAAAGGAAAGGGCATAATGGAGAACAGGAGGCCGACAATGCCAGTCTATGTGGATCCTAATTTCAATCCCAGAAGAGACTCTTCAACCTCTCAATCTCATAATTCATCTTTATCAAATGCTACTGCCTCCACTGTTGTTCTATCAGGAAGGTGA 1971 0.4115 MFLYLQQKPYFVFFLGLIIIWSCGTLDGVVSDPQTTFVKIGCSQYNVSDLSIFSDNLNITLRDLRAQISNQSKHFATAQAVKGNNPAYGLFQCRNYLSIKDCLACFDYAVVHIRNCSVGVTGARIFYEGCTLRYESSGFFDQNSDAGNNIICGNQTIKNTTALASTVQQVITNLDIATPKTKDFYAATKTPVPNSNGTNIYAFAQCIESITSAGCQDCLNIALRNFQICLPNSNAKTYDIGCFMRYSTTAFFADNQTINIWPFLKQGGGSSKKKAIIGGVVGGVSFLLILLALFVWYKRSTSSKRIHRGDILGATELKGPINYRYKDLKKATKNFSKENKLGEGGFGDVYKGTLKNGKVVAVKKLALGQSKQMEKDFESEVKLISNVHHRNLVRLLGCCSKGQERLLVYEYMRNNNVGTFLFGKNKGSLNWKQRYNIILGTARGLAYLHEEFHVCIIHRDIKTSNILLDDDLQPKIADFGLARLLPHDLSHLNTKFAGTMGYTAPEYAMHGQLSEKADTYSYGVVVLEIISGHKSGETKDDVESEFLLQRAWKLYDRGVHLEFVDNTLDPNEYDPEEVKKIIEIALLCTQASPAARPTMSEIVIMLKGKGIMENRRPTMPVYVDPNFNPRRDSSTSQSHNSSLSNATASTVVLSGR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1058 656 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Mibi08g1058 656 SUPERFAMILY Protein kinase-like (PK-like) 320 635 IPR011009 -
Mibi08g1058 656 Gene3D Phosphorylase Kinase; domain 1 298 411 - -
Mibi08g1058 656 CDD STKc_IRAK 341 608 - -
Mibi08g1058 656 FunFam Cysteine-rich receptor-like protein kinase 2 300 411 - -
Mibi08g1058 656 FunFam Cysteine-rich receptor-like protein kinase 2 147 251 - -
Mibi08g1058 656 Gene3D Transferase(Phosphotransferase) domain 1 412 618 - -
Mibi08g1058 656 ProSiteProfiles Protein kinase domain profile. 335 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1058 656 SMART serkin_6 335 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1058 656 Pfam Protein tyrosine and serine/threonine kinase 337 604 IPR001245 GO:0004672|GO:0006468
Mibi08g1058 656 MobiDBLite consensus disorder prediction 628 656 - -
Mibi08g1058 656 FunFam Cysteine-rich receptor-like protein kinase 2 34 139 - -
Mibi08g1058 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Mibi08g1058 656 FunFam Cysteine-rich receptor-like protein kinase 2 412 614 - -
Mibi08g1058 656 ProSiteProfiles Gnk2-homologous domain profile. 145 251 IPR002902 -
Mibi08g1058 656 MobiDBLite consensus disorder prediction 624 656 - -
Mibi08g1058 656 Pfam Salt stress response/antifungal 155 248 IPR002902 -
Mibi08g1058 656 Pfam Salt stress response/antifungal 45 136 IPR002902 -
Mibi08g1058 656 Gene3D - 34 139 IPR038408 -
Mibi08g1058 656 Gene3D - 147 251 IPR038408 -
Mibi08g1058 656 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 642 - -
Mibi08g1058 656 ProSiteProfiles Gnk2-homologous domain profile. 35 139 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1058 Mibi-ChrMibi08 24952510 24956171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1058 5 656 Receptor kinase-like Gene Family AT1G70520 36.199 1.18e-127 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1058 PK_Tyr_Ser-Thr 7.9e-51 CL0016