Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1057 ATGTTCCAACATTCTCATCTCCTTCCCTTTCTAATCTACATATTTTGGTCATGCAACATTCTTGGTGGTGTCGTTTCAGACCCACAAATTCATCTTCTTAGTGCTCAGTGCAATCCACCAGACTTCTTCCTCGTTTCCGACTCCATAGTCCTCACCGAAAACCTAAACGCAACGTTTACGGACATCAGAGGCCAAATTAAGGACCAAAATAAGTACTTCGCTACAGCACAACAAGGAAGTGGAGAAAATTTTCCAGTTTACACACTTTTTCAATGTAGAAACTATCTTTCCACCTCTGACTGTGCCGCCTGCTTCGAAGTCGCCGCCGGTCAGATTCGTAAGTGTGCCGCCGCTGCCTCCCCGTCACCAGGTGCCTACGTCGTCTACGACGGCTGCTTCATTAGGTACAATTACAACACTTTCTTTAACGAGGCAACGAATACTTTCAATGGTGTATCATGTGGGAATGAGACTGCAGGAGGGGCCTCTGCATTTACGGAAGCAACTCAACAAGTCCTAACGAGCCTCCAAGTATCAACACCCACAATCCCTAGTTTCTTTGGAACTACGAAGATTCAACTTCCAAACAATGGTTCAACTATTTATGCCTTTGCTCAATGTGCTGATAGTATCACAAGGAGTGGGTGCCAAGCTTGCCTGAAGACTGGGTACAGTAATTTGCAGATTTGTCTTCCCTTCTCAGATGGTAGAGCTTTTGATGCAGGCTGTTTCATGAGATATTCTACTACTTCCATTTTTCCCAATAACCAATCAATTGATATCACACCCTTTGTCCAAAAAGGTTCTTTAAGCAACAAAGGGTCAATTGGTGGAGCTGTTGGAGGTGTAGCCCTTGCTTTGCTCCTCCTAGCATTATTTGCCTGGATTAAAGGACGAAAACGCAATAAGACGATTCTCAGAGGAAACCACTTGAGAAGCGACTTAACGGGAGTAAGCAAGTTGAAAGGCCCACTTACTTACAGTTATAACGATTTGGTACTTGCAACAAAAAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGATTTGGGGCTGTATTCAAGGGCACTTTTAAGAATGGGAAAGTTGTTGCAGTCAAGAAATTGACTTCATACTACACCAAGAGGTTGGAGGAAGAATTTGAAAGTGAAGTAACACTTATAAGTAATGTTCATCATCGGAATCTTGTTCGACTTCTGGGATGTTGTAGTAAAGGCTACAATAAAATCCTTGTCTACGAGTACATGAAAAACAGCAGTCTTGATAAATTCATATTTGGTAAAAAGAAAGGTTCTCTCAATTGGAAGCAACGATATGACATAATTTTAGGAACAGCAAGAGGTTTGACTTATTTGCATGAGGAATTTCATATTCGTATCATACATAGAGATATCAAGACTAACAACATCCTCTTAGATGATGATCTACAACCTAAGATTGCTGATTTTGGGCTAGCAAGGTTTTTACCTCAGGACAAAACCCATTTAAGCACAAGAATCGCAGGAACATTAGGATATACTGCACCAGAGTATGCAATTTATGGCCAATTATCGGAGAAGACTGATATCTATAGCTATGGAGTCGTAGTTTTGGAAATCATCAGTGCTCAAAAGTGTAGAGAATTGAATATTGTTGGAGATGATGAAGGGGCATTCCTTCTTCAAAAAGCTTGGAACCTATATGAGAAAGGAAGGCATTTAGAGTTAGTGGATAAGACCTTAGACCCTAATGGTTATGATGCAAAAGAAGTGAAGAAAATCATTGAGATTGGTCTGCTTTGCACCCAAGCTTCCGCTGATACAAGGCCATCGATGTCTGAAGTAGTTGCTTTGCTTCAAAGCAAGGATTTATCAGAGAACATAAGGCCCACTATGCCTATCTTGATAGAAACTAATTAA 1899 0.4081 MFQHSHLLPFLIYIFWSCNILGGVVSDPQIHLLSAQCNPPDFFLVSDSIVLTENLNATFTDIRGQIKDQNKYFATAQQGSGENFPVYTLFQCRNYLSTSDCAACFEVAAGQIRKCAAAASPSPGAYVVYDGCFIRYNYNTFFNEATNTFNGVSCGNETAGGASAFTEATQQVLTSLQVSTPTIPSFFGTTKIQLPNNGSTIYAFAQCADSITRSGCQACLKTGYSNLQICLPFSDGRAFDAGCFMRYSTTSIFPNNQSIDITPFVQKGSLSNKGSIGGAVGGVALALLLLALFAWIKGRKRNKTILRGNHLRSDLTGVSKLKGPLTYSYNDLVLATKNFSEENKLGEGGFGAVFKGTFKNGKVVAVKKLTSYYTKRLEEEFESEVTLISNVHHRNLVRLLGCCSKGYNKILVYEYMKNSSLDKFIFGKKKGSLNWKQRYDIILGTARGLTYLHEEFHIRIIHRDIKTNNILLDDDLQPKIADFGLARFLPQDKTHLSTRIAGTLGYTAPEYAIYGQLSEKTDIYSYGVVVLEIISAQKCRELNIVGDDEGAFLLQKAWNLYEKGRHLELVDKTLDPNGYDAKEVKKIIEIGLLCTQASADTRPSMSEVVALLQSKDLSENIRPTMPILIETN 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1057 632 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 87 628 - -
Mibi08g1057 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Mibi08g1057 632 Gene3D Transferase(Phosphotransferase) domain 1 416 624 - -
Mibi08g1057 632 FunFam Cysteine-rich receptor-like protein kinase 2 416 620 - -
Mibi08g1057 632 FunFam Cysteine-rich receptor-like protein kinase 2 149 252 - -
Mibi08g1057 632 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Mibi08g1057 632 ProSiteProfiles Gnk2-homologous domain profile. 30 141 IPR002902 -
Mibi08g1057 632 FunFam Cysteine-rich receptor-like protein kinase 2 303 415 - -
Mibi08g1057 632 Gene3D - 32 141 IPR038408 -
Mibi08g1057 632 Gene3D - 146 251 IPR038408 -
Mibi08g1057 632 Gene3D Phosphorylase Kinase; domain 1 304 415 - -
Mibi08g1057 632 SMART serkin_6 339 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1057 632 ProSiteProfiles Protein kinase domain profile. 339 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1057 632 Pfam Salt stress response/antifungal 158 249 IPR002902 -
Mibi08g1057 632 Pfam Salt stress response/antifungal 53 137 IPR002902 -
Mibi08g1057 632 ProSiteProfiles Gnk2-homologous domain profile. 147 252 IPR002902 -
Mibi08g1057 632 Pfam Protein tyrosine and serine/threonine kinase 342 611 IPR001245 GO:0004672|GO:0006468
Mibi08g1057 632 CDD STKc_IRAK 345 613 - -
Mibi08g1057 632 SUPERFAMILY Protein kinase-like (PK-like) 319 612 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1057 Mibi-ChrMibi08 24905767 24911177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1057 6 616 Receptor kinase-like Gene Family AT1G70520 35.048 3.49e-114 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1057 PK_Tyr_Ser-Thr 3.5e-49 CL0016