Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1054 ATGCTCCAACCTCCTTGTAATAATCTCCTTCCATTATTATCTACCTTCATATTCTGCTCATGCTGGGCTCTTAACGTCGTCGTTTCAGACCCACAAACCAATCTTCTTAAGATCCGGTGCAACCCATACGACGGCGTTGTAACCAACGCCTCAACCGTTGATGAAAACCTAATCGTAACCTTCCAAGACATCAGGCGGCAGATAAGTGACCAAAACAAACACTTCGCTAAAGCTGCGATGGAGGCAAATGGAGCTCCTGTTTACACTATTTTTCAGTGTAGAAACTATCTGTCCGTCGACGACTGTGCCGCGTGTTTCGACGTTGCCGCCGACCGAATCCGGAGTTGCATCGCCACCTTGGCCTCCGCCGCCCTTGCCGTGTATGATGGTTGCTTCATCAGGTACAATTCCAATGGTTTCTTTGATGAGGCGCCACAACCTTTCAATATCGTATCGTGTGGGAATGAGACAACGGGAGAAGCTGCCACAACATTAAACACAACAGTGCAACAAGTGCTAATGAATCTTCAAACAGCAACACCTAAAATCCCTAGTTTCTCTGCTGCCACGAAGATTGTTGATCCTAACAATAATGGTGTGACTATTTATGCTTATGCTCAATGCGTTGAAACTGCCACAATGAACGAGTGCCTTGATTGCTTGAAGGTTGATTACAATAGCGTCGAGATTTGTCTTCCCAATTCGGATGGTGTAGCATTTGATTATAGTTGTTTCATGAGATACTCCACCACTTCCTTTTTTCCTGATAACCAGACCATTCATATCACACCCTCATCTGTCAAACGAGGTTCAAGCAATAAGGGGGCTATTATTAGCGTGTTAGTTAGCAGTATTGCTCTTGTTTTGATGCTCCTTGGATTGTTTGCGTGGATTAGACGACCTAAAAGGAATGATAAAACTCCTAGAGATGACGTAATTGGAGCAAGCAACTTGAAAGGCCCAATTACTTACCGTTATAGTGATTTGGTCTCGGCAACGAACAATTATAGTTCAGAAAATATACTAGGAGAGGGAGGATTTGGGGCTGTATACAAGGGCACTTTGAAGAATTTTGGATTGGCAAGGCTCTTACCTGGTGACAAAACTCATCTTAGCACAAAAATTGCTGGAACATTGGGATATACATCACCGGAGTATGCAATTCATGGTCAGTTATCAGAAAAAGCTGATATATATAGTTACGGAGTTGTTGTTTTAGAAATCATTAGTGGACAAAAGTGCACAGAATTGAGGCTCGATTGTGATGATGAAGGCGCATTCCTCATTCAAAAAGCGTGGAAACTATATGAGAAAGAAAAACACTTGGAATTAGTGGACAAGGCCCTAGACCTTAATGTCTATGATGAAGAAGAAGTGAAAAAAATCATAGAGATTGGTTTGCTTTGCATCCAAGCATCTGCTGATGTAAGGCCAACGATGTCCGAAGTAGTTGCTTTGCTTCAAAACAAGGATTTATTAGAGAACTTGAGACCCACCATGCCTATCTTGATTGATATTAATTAG 1524 0.4232 MLQPPCNNLLPLLSTFIFCSCWALNVVVSDPQTNLLKIRCNPYDGVVTNASTVDENLIVTFQDIRRQISDQNKHFAKAAMEANGAPVYTIFQCRNYLSVDDCAACFDVAADRIRSCIATLASAALAVYDGCFIRYNSNGFFDEAPQPFNIVSCGNETTGEAATTLNTTVQQVLMNLQTATPKIPSFSAATKIVDPNNNGVTIYAYAQCVETATMNECLDCLKVDYNSVEICLPNSDGVAFDYSCFMRYSTTSFFPDNQTIHITPSSVKRGSSNKGAIISVLVSSIALVLMLLGLFAWIRRPKRNDKTPRDDVIGASNLKGPITYRYSDLVSATNNYSSENILGEGGFGAVYKGTLKNFGLARLLPGDKTHLSTKIAGTLGYTSPEYAIHGQLSEKADIYSYGVVVLEIISGQKCTELRLDCDDEGAFLIQKAWKLYEKEKHLELVDKALDLNVYDEEEVKKIIEIGLLCIQASADVRPTMSEVVALLQNKDLLENLRPTMPILIDIN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1054 507 ProSiteProfiles Gnk2-homologous domain profile. 35 140 IPR002902 -
Mibi08g1054 507 Gene3D Phosphorylase Kinase; domain 1 301 359 - -
Mibi08g1054 507 FunFam Cysteine-rich receptor-like protein kinase 2 148 253 - -
Mibi08g1054 507 Pfam Salt stress response/antifungal 153 250 IPR002902 -
Mibi08g1054 507 Pfam Salt stress response/antifungal 48 137 IPR002902 -
Mibi08g1054 507 ProSiteProfiles Protein kinase domain profile. 147 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1054 507 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 357 - -
Mibi08g1054 507 Gene3D Transferase(Phosphotransferase) domain 1 360 499 - -
Mibi08g1054 507 ProSiteProfiles Gnk2-homologous domain profile. 147 253 IPR002902 -
Mibi08g1054 507 SUPERFAMILY Protein kinase-like (PK-like) 356 494 IPR011009 -
Mibi08g1054 507 SUPERFAMILY Protein kinase-like (PK-like) 316 356 IPR011009 -
Mibi08g1054 507 Pfam Protein tyrosine and serine/threonine kinase 357 486 IPR001245 GO:0004672|GO:0006468
Mibi08g1054 507 Gene3D - 148 253 IPR038408 -
Mibi08g1054 507 Gene3D - 32 140 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1054 Mibi-ChrMibi08 24746525 24753791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1054 355 487 Receptor kinase-like Gene Family AT1G56120 49.254 1.94e-34 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1054 PK_Tyr_Ser-Thr 1.7e-09 CL0016