Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1052 ATGCTTCAAAATCATCGTCCCGATCTCATACTCTTAGTTACCTTCATATTATTCCTCTCATTTTGTGCCCTTAACGGCGTTGTTTCAGATCCACAGACCCACCTTCTGAGCAGTTTTTGCAACCCATATAACCCATTGCTAATCTCCAACATATCCATGTATGATGAAAACCTAAACGCAACGTTTCAGTACATTAGAAACCAGATCAGTGACCAAAACAAGCACTTTGCCACTTCACAAGAAGCCAATGGAGGAAACCCTGTTGCCACTCTCTTTCAATGCAGAAATTATCTCTCGGCCCCCGACTGTGTCGCCTGCTTCGATGTCGCCGCCGTGAAAATTCACACTATTTGCATCGCTGGGTCCCCTAGTGGTTTTGTTGTTTACGATGGCTGCTTCCTCAGGTATGATGGCAGCACCGCTTTCTTTGGCGAGACAACGCCGTCAATTAACAGCGTAGCATGTGGGAACCAAACTGTTGACGGAGAAGCCACCGCATTTGACTCAACAGCTCAACAAATTCTAACGAATCTCCAAACTACAACACCCACAACCAATGGTTTCTTTACAGCCTCAAAGATGCAAGTTCCAAATAATAATAATAATAATAATAATAACACTCAGACTATCTATGCTTTTGCTCAATGTATTCAAACTATCACACAGAATCAGTGCCTCAGTTGCTTGAATTCTGCGTATAGCAATTTGCAAACTTGTTTTCCCAATTCAGATGGTAGAGCTTATGCTAATGGCTGCTTCATGAGATACTCAACCACTTCCTTCTTTCCTGATGATCAGACCTTTCATATCGTACCCCTGGTCAAACCAGGTTCTAATAAGAAGGGAGCCATTATAGGAGTAGTTGTTGGAGGTGTAGCTTTTGTTTTGATTCTCCTTGCACTATTAGCTTGGATTAAACGTCCTAAAAGGCGTGAGAGACCAGTTCCTAGAGGAGAAATATCTGGAATAAGTAAGTTGAAGGGCCCAGTAAGTTTTAATTATAAAGAGTTGAAGTTTGCTACCAAAAGTTTCAGTGCAGAAAATAAACTTGGAGAAGGAGGATTTGGTGCTGTATACAAGGGTACTTTGAAGAATGGGAAGGTAGTTGCTGTAAAGAAATTAACTTTACGCCAGTCTAAGAAGGTGGATGAAGAATTTGAAAGTGAAGTGACACTTATAAGCAATGTTCACCATCGGAACCTTATTCGGCTTCTTGGATGTTGCAGCAAAGGCAATGAGAGAATTCTGGTTTATGAATATATGAAAAACACGAGTCTTGACAAATTCTTATTTGGTAAAAATAGGGGTTCTCTTAGTTGGAAGCAGCGGTATGATATAATTTTAGGAACAGCAAGGGGTTTGACATATTTACATGAAGAATTTCATGTACGTATCATACATAGAGATATAAAGACTAATAATATTCTCTTAGATGATGATCTTCAACCAAGAATTGCTGATTTTGGCTTAGCAAGACTTTTACCTGATGAAAAAACTCATCTTAAGACAAAATTTGCCGGAACATTAGGATACACGGCACCAGAATATGCTATTCATGGACAATTATCAGAAAAAGCTGATATTTATAGCTATGGCGTTGTAGTCTTAGAAATTATTAGTGGGCAACGAAGTGGTGAATTGAATATGCAGGGTGATCATGAAGGCGCTTTCCTCCTTCAAACAGCTTGGAAACTATATGAAAGAGGCTTACACATAGAGTTGGTGGACGAAACCTTGGACCCTAATGATTATGATGTAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACCCAAGCATCAGCTGAGTTAAGACCATCAATGTCAGAAGTAATTGTTTTGCTCCAAGGAAATGGCTTATTAGAGAATATGATACCCACCATGCCCATCTTGATTGAAACAAATTAG 1914 0.396 MLQNHRPDLILLVTFILFLSFCALNGVVSDPQTHLLSSFCNPYNPLLISNISMYDENLNATFQYIRNQISDQNKHFATSQEANGGNPVATLFQCRNYLSAPDCVACFDVAAVKIHTICIAGSPSGFVVYDGCFLRYDGSTAFFGETTPSINSVACGNQTVDGEATAFDSTAQQILTNLQTTTPTTNGFFTASKMQVPNNNNNNNNNTQTIYAFAQCIQTITQNQCLSCLNSAYSNLQTCFPNSDGRAYANGCFMRYSTTSFFPDDQTFHIVPLVKPGSNKKGAIIGVVVGGVAFVLILLALLAWIKRPKRRERPVPRGEISGISKLKGPVSFNYKELKFATKSFSAENKLGEGGFGAVYKGTLKNGKVVAVKKLTLRQSKKVDEEFESEVTLISNVHHRNLIRLLGCCSKGNERILVYEYMKNTSLDKFLFGKNRGSLSWKQRYDIILGTARGLTYLHEEFHVRIIHRDIKTNNILLDDDLQPRIADFGLARLLPDEKTHLKTKFAGTLGYTAPEYAIHGQLSEKADIYSYGVVVLEIISGQRSGELNMQGDHEGAFLLQTAWKLYERGLHIELVDETLDPNDYDVEEVKKIIEIGLLCTQASAELRPSMSEVIVLLQGNGLLENMIPTMPILIETN 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1052 637 SUPERFAMILY Protein kinase-like (PK-like) 325 617 IPR011009 -
Mibi08g1052 637 Gene3D - 149 261 IPR038408 -
Mibi08g1052 637 Gene3D - 32 140 IPR038408 -
Mibi08g1052 637 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Mibi08g1052 637 SMART serkin_6 344 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1052 637 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 91 634 - -
Mibi08g1052 637 Pfam Protein kinase domain 345 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1052 637 ProSiteProfiles Protein kinase domain profile. 344 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1052 637 FunFam Cysteine-rich receptor-like protein kinase 2 421 625 - -
Mibi08g1052 637 CDD STKc_IRAK 350 619 - -
Mibi08g1052 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Mibi08g1052 637 ProSiteProfiles Gnk2-homologous domain profile. 148 261 IPR002902 -
Mibi08g1052 637 FunFam Cysteine-rich receptor-like protein kinase 2 150 261 - -
Mibi08g1052 637 Pfam Salt stress response/antifungal 51 137 IPR002902 -
Mibi08g1052 637 Pfam Salt stress response/antifungal 162 258 IPR002902 -
Mibi08g1052 637 Gene3D Phosphorylase Kinase; domain 1 319 420 - -
Mibi08g1052 637 Gene3D Transferase(Phosphotransferase) domain 1 421 624 - -
Mibi08g1052 637 ProSiteProfiles Gnk2-homologous domain profile. 36 141 IPR002902 -
Mibi08g1052 637 FunFam Cysteine-rich receptor-like protein kinase 2 309 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1052 Mibi-ChrMibi08 24655952 24660779 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1052 9 628 Receptor kinase-like Gene Family AT1G70520 36.825 1.89e-118 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1052 Pkinase 6e-50 CL0016