Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1051 ATGACTCAACCTCATCATCATCTCCTTCTCTTATTTGCCTTCATATTCTGCTCATACTGGATCCTTTACGGCGTCGTTTCAGATCCCCAAACCAAAGGGTGCAACCCATACTACCAATTCTTGGTATCCAACGTCACTCTCTTCGATGAAAACATAAACGCAACGTTGCGAGACATCAAAGAGAACATTATCAATGGCCAAAACAAACACTTCGCCACCTCACAGGTAGCTGCCAGTGGTGGAAACACAGTCTCTACTCTTTTTCAATGTAGAAGTTACCTCTCCGTCGCCGATTGCACTGCCTGCTTTGACGTCGCCGCCTCTGAACTTCTTGGCTGTGCTTCTGGCGACCCTGGCGGCCATGTTGTCTATGACGGATGCTTCCTCAGATATGACATTAGTCGCGCTTTCTTTGGCGATACAACACAGTCTATCAATAGTGCATCATGTGGGAATCAGACTACAAAACAACCTGCTTCTACATTTTCCTCAGCTGTTGAACAAATTCTAATGAATCTCCAAACAGCAACACCCAAAATCACTGGCTTCTCTGCTGCCACAAAAACGGAAGTGCCTAATAATGGTTCAACTATTTATGCATATGCTCAATGAGATATAATTGGAGCAAGCAAGTTGAAAGGCTCAGTTATTTATAATTATAAGGACTTAAAGACTGCAACCAAGAATTTCAGTGAAGAAAATAAACTAGGAGAAGGAGGATTTGGTGTCGTATATAAGGGCACTTTGAAGAATGGAAAAGAAGTTGCAGTCAAGAAATTAACATTTCACCAATTTACCAAGGTGGAGGAGGACTTTGAAAATGAAGTGATACTTATAAGTAATGTTCATCATCGGAATCTTGTTCGTCTCATCGGATATTGTATTCATGACAAGGATAGAATCCTTGTTTATGAATACATGAAAAATAGCAGTCTCGACGTTTTCTTATATGGTAAAATGAAAGGCTCACTCAACTGGAAGCAAAGATATGATATAATTTTAGGCATGGCAAAAGGGTTGGCTTATTTACACGAGGAATTTCATGTTTGTATCATACATAGAGATATAAAGCCTAATAATGTTCTCTTAGATGATGATCTTCAACCTAAAATTGCTGATTTTGGATTGGCAAGACTTCTACCTGGTGATAAATCTCATCTTAGCACCAAATTTGCAGGAACATTAGGATACACAGCACCAGAGTATATATTTCATGGCCAATTATCTGAGAGGACTGATGTCTATAGTTATGGTGTTGTAATATTGGAGATTGTCGGTGGCCGAAAAAGTAAGGAACTAAGAGTCCATAGCGATAGTGAAGGCGAATTCTTCCTTCAAAGAGCTTGGGAACTATATGAAAAGGGCATGCATGTGGAGCTAGTGGACGATGCCTTAGACCCTATTGATTATGATGTGGAAGAAGTGAAGAAGGTTATAGAGATTGGTTTGCGTTGCACCCAGTCATCTCCTGTAATGAGGCCAACAATGTCCGAAGTTGTTGCTTTGCTCCAAAATAAGGACTTGTTAGATAATATGATACCCAATATCACTATGCCTGTCTTTATTGAACCAAATTAA 1578 0.3992 MTQPHHHLLLLFAFIFCSYWILYGVVSDPQTKGCNPYYQFLVSNVTLFDENINATLRDIKENIINGQNKHFATSQVAASGGNTVSTLFQCRSYLSVADCTACFDVAASELLGCASGDPGGHVVYDGCFLRYDISRAFFGDTTQSINSASCGNQTTKQPASTFSSAVEQILMNLQTATPKITGFSAATKTEVPNNGSTIYAYAQXDIIGASKLKGSVIYNYKDLKTATKNFSEENKLGEGGFGVVYKGTLKNGKEVAVKKLTFHQFTKVEEDFENEVILISNVHHRNLVRLIGYCIHDKDRILVYEYMKNSSLDVFLYGKMKGSLNWKQRYDIILGMAKGLAYLHEEFHVCIIHRDIKPNNVLLDDDLQPKIADFGLARLLPGDKSHLSTKFAGTLGYTAPEYIFHGQLSERTDVYSYGVVILEIVGGRKSKELRVHSDSEGEFFLQRAWELYEKGMHVELVDDALDPIDYDVEEVKKVIEIGLRCTQSSPVMRPTMSEVVALLQNKDLLDNMIPNITMPVFIEPN 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1051 525 ProSitePatterns Protein kinases ATP-binding region signature. 236 259 IPR017441 GO:0005524
Mibi08g1051 525 SUPERFAMILY Protein kinase-like (PK-like) 215 511 IPR011009 -
Mibi08g1051 525 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 62 523 - -
Mibi08g1051 525 Gene3D Transferase(Phosphotransferase) domain 1 307 513 - -
Mibi08g1051 525 Pfam Salt stress response/antifungal 44 132 IPR002902 -
Mibi08g1051 525 CDD STKc_IRAK 236 505 - -
Mibi08g1051 525 Pfam Protein kinase domain 231 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1051 525 ProSiteProfiles Protein kinase domain profile. 230 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1051 525 FunFam Cysteine-rich receptor-like protein kinase 2 200 306 - -
Mibi08g1051 525 FunFam Cysteine-rich receptor-like protein kinase 2 307 511 - -
Mibi08g1051 525 SMART serkin_6 230 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1051 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672|GO:0006468
Mibi08g1051 525 ProSiteProfiles Gnk2-homologous domain profile. 27 136 IPR002902 -
Mibi08g1051 525 Gene3D Phosphorylase Kinase; domain 1 205 306 - -
Mibi08g1051 525 Gene3D - 32 135 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1051 Mibi-ChrMibi08 24602865 24609075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1051 218 504 Receptor kinase-like Gene Family AT1G56120 52.778 3.91e-93 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1051 Pkinase 3.8e-50 CL0016