Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1042 ATGCTTCAACCCCATAGTAAACGGACCTGGCTTCTCTCAGCTGCCAGGTCCGTGCGCTGCGCGGAGAGAAGCCAGGTCCATAGTAAACTCCTTTCTCTGACCATAATCATTTTCATCTGGTCATGGAGCATACTTAACGGAGTCCTTTCAGATCCACAGGCCAATCTTGTAAATAAAGTGTGCACCCCAACTAGTTTACTGTTGCAACCTAACTACTCCCTCATTCATGAAAGCATTAACGCAACATTTGGATCCATCAGAGAACAAGTTGTCGCTCAAAATAAGTACTTTGGGACAGCACAGCAAGGAAATGCAGATTTCCCCGTTTACACACTTTTTCAGTGCAGAAACTACCTCTCTATTGTTGATTGTGTTGCTTGCTTCGACGTTGCCGCCGTACAAATCCGCAACTGCTCTGTTTCTTCGATCGGCGGCTATGTTGTCTACGACGGTTGTTTTCTCAGGTGCGAGATCAATGATTTCTTTGAGCGGGCAACGGGGGATTTTGATGCAGTATCTTGTGGAAATCAAACTGATGGAGAATCCACTACCTCATTTAACTCACTTGTACAAGAAGTGCTAAAGAATCTGCAAACAACAACACCCACAAAACAAGGGTTTTTCACAGCCACAAAATCAGAATTGCCTAATAATGGCACAACTATTTATGCCTTTGCTCAGTGTATTGAAACTGTCAATCAGAGTGGGTGCTACAACTGCTTGAACACTGGCTATAATAATATGCAAACTTGTCTTTCCCATTCGGATGGTAGGGCTTTTGATAATGGGTGCTTCATGAGATACTCCACATCTTCCTTCTTTCCACTTAATTACCATACGATTGATATCTTTACTTCCTTGGTCGTCAAACAAGGTTCAAGCAAAAAAGGATCCATTGTTGGTGGAGTTGTTGGAAGTTCGGCTTTTCTTTTGATCCTCCTGGCCTTTTTTGCCTGGATCAGACGACAAAAAGCCCCTAAAAACGTTCCCAGAGGAGAGATAACTGGAGCAAGCAAGTTACACGGCACAGTTACTTATAGTTTTAAGGATTTGAAGTTCGCAACCAAGAATTTTTGTGAAGAAAATAAACTAGGACAAGGAGGGTTTGGTGTTGTATACAAGACTCATCTCACCACAAAAGTTGCTGGAACATTAGGATACACGGCACCTGAGTATCTCATTTATGGCCAATTATCAGAGAAGGCTGATATATATAGTTATGGTGTTGTAGTCTTGGAGATCATTAGTGGTCGACACAGTAAAGAATTAACCATTGAAGGTGATGCTGAGGGTGAATATCTCCTTCAAAAAGCTTGGAAATTATATGAGAGAGGCATGCACCTAGAGTTGGTGGACAAGACCATAGACCCTAATGAGTATGATGAAGACGAAGTGAAGAAAATCGTAGAGATTGGTTTGCTTTGCACTCAAGCATCTACTGAAGCAAGGCCAATGATGTCTGAAGTTGTTGTTTTGCTCCAAAACAAGGATTTATTAGAGAATATGAAGCCCACTATGCCTATATTAATTGAAACTAATTAA 1542 0.4163 MLQPHSKRTWLLSAARSVRCAERSQVHSKLLSLTIIIFIWSWSILNGVLSDPQANLVNKVCTPTSLLLQPNYSLIHESINATFGSIREQVVAQNKYFGTAQQGNADFPVYTLFQCRNYLSIVDCVACFDVAAVQIRNCSVSSIGGYVVYDGCFLRCEINDFFERATGDFDAVSCGNQTDGESTTSFNSLVQEVLKNLQTTTPTKQGFFTATKSELPNNGTTIYAFAQCIETVNQSGCYNCLNTGYNNMQTCLSHSDGRAFDNGCFMRYSTSSFFPLNYHTIDIFTSLVVKQGSSKKGSIVGGVVGSSAFLLILLAFFAWIRRQKAPKNVPRGEITGASKLHGTVTYSFKDLKFATKNFCEENKLGQGGFGVVYKTHLTTKVAGTLGYTAPEYLIYGQLSEKADIYSYGVVVLEIISGRHSKELTIEGDAEGEYLLQKAWKLYERGMHLELVDKTIDPNEYDEDEVKKIVEIGLLCTQASTEARPMMSEVVVLLQNKDLLENMKPTMPILIETN 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1042 513 Pfam Salt stress response/antifungal 77 157 IPR002902 -
Mibi08g1042 513 Pfam Salt stress response/antifungal 174 270 IPR002902 -
Mibi08g1042 513 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 111 377 - -
Mibi08g1042 513 SUPERFAMILY Protein kinase-like (PK-like) 339 378 IPR011009 -
Mibi08g1042 513 FunFam Cysteine-rich receptor-like protein kinase 2 170 273 - -
Mibi08g1042 513 CDD TM_EGFR-like 293 324 - -
Mibi08g1042 513 ProSiteProfiles Gnk2-homologous domain profile. 56 161 IPR002902 -
Mibi08g1042 513 Gene3D Phosphorylase Kinase; domain 1 323 379 - -
Mibi08g1042 513 ProSiteProfiles Protein kinase domain profile. 158 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1042 513 SUPERFAMILY Protein kinase-like (PK-like) 376 498 IPR011009 -
Mibi08g1042 513 Gene3D - 168 273 IPR038408 -
Mibi08g1042 513 Gene3D - 54 161 IPR038408 -
Mibi08g1042 513 Gene3D Transferase(Phosphotransferase) domain 1 380 507 - -
Mibi08g1042 513 Pfam Protein tyrosine and serine/threonine kinase 385 491 IPR001245 GO:0004672|GO:0006468
Mibi08g1042 513 ProSiteProfiles Gnk2-homologous domain profile. 168 273 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1042 Mibi-ChrMibi08 24357632 24362598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1042 374 511 Receptor kinase-like Gene Family AT1G70520 38.462 2.32e-26 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1042 PK_Tyr_Ser-Thr 1.8e-07 CL0016