Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1040 ATGCTTCTGCCTCCGAATCTCCTCACCGTATTTATCTTCATATTCTGGTCATGCTGGAATATAAACGGCGTCGTTTCAGACCCGCAGGCCAATCTTCTAAAGATAGGGTGCAGCACACCCAACGAGTTCGTCGTCTCCGACTACACCATCTTCAATCACAATCTAAACTCAACGTTGAATGAAATCAGAGAGAAAATCAGTGACCCAAACAAGCACTTCGCCACTGCACGTGAAGGCGACGGAGGAAACCCTATTTCCACCCTTTTCCAATGCAGAAACTATCTCTCCCTTGCTGACTGTGTCAAATGCTTCGATGTAGCGGCCGCACAAATCCGCAACTGCTCCGTTGGCTCCTACGGTGGCCATGTCGTTTACGATGGCTGCTTCCTCAGATATGAGGCTGGTGATTTTTACGGCGAGACGATAGGGTCTTTGACTAAAGTATTGTGCGGCAATCAAAAAGCCAGAGATGCCATTGAATTCACTGAAACTGCCCAAAAATTGCTAATGAACCTCCAAACAGCAATACCCACAATTCCTGGTTTCTTTGCAGCCACAAAGATACAAAGGCCTAATAATAATGGTGATACTATTTACGCTTTTGGCCAATGTATTGGTACTGTCACACAAAGTGGATGTCTAGATTGCTTAAAGGCTGTGGATAGCAATATCCAGATTTGCCTTTCCAAGTCACAGGGAAAGGCTTTTGATGCTGGGTGCTTCATGAGATACTCCACCACTTCATTCTTTGCTGATAATCAGACCATTGATATCACCCCCTTGGCCAAATCAGGTACAAAAATGAAACGGTACATTATTGGAGTTGTTGCTGGTATAGCTTTTCTTTTGATACTCTTCGCATTATTTGCCTGGATCAGACGACCCAAAACCCCTAACAATGTTCCCAGAGGAGAGATAACTGGAGTTAGCAAGTTAGCCCGTCCAGTTACTTACAGTTATAAGGATTTGAAGTTTGCAACTAAGAATTTTAGTCAAGAAAATAAAGTAGGAGAAGGAGGGTTTGGTGCTGTATACAAGCCAAAAATTGCTGATTTTGGATTGGCAAAGCTTTTGCCCGAGGACAAATCTCATCTTAGCACAAAATTTGCTGGAACATTAGGATATACAGCACCTGAGTATCTCATCCATGGGCAATTATCAGAGAAGGCTGATATATATAGTTATGGTGTTGTGGTCTTAGAAATCATTAGTGGTCAACGAAGTAAGGAATTAACCATTGATGGCGATGCAGAGGGTGAATTCCTCCTTCAAAAAGTGAGAAAATTCCCAGCATTTTCCAAAAATACCCTTCTTTGTTAG 1320 0.428 MLLPPNLLTVFIFIFWSCWNINGVVSDPQANLLKIGCSTPNEFVVSDYTIFNHNLNSTLNEIREKISDPNKHFATAREGDGGNPISTLFQCRNYLSLADCVKCFDVAAAQIRNCSVGSYGGHVVYDGCFLRYEAGDFYGETIGSLTKVLCGNQKARDAIEFTETAQKLLMNLQTAIPTIPGFFAATKIQRPNNNGDTIYAFGQCIGTVTQSGCLDCLKAVDSNIQICLSKSQGKAFDAGCFMRYSTTSFFADNQTIDITPLAKSGTKMKRYIIGVVAGIAFLLILFALFAWIRRPKTPNNVPRGEITGVSKLARPVTYSYKDLKFATKNFSQENKVGEGGFGAVYKPKIADFGLAKLLPEDKSHLSTKFAGTLGYTAPEYLIHGQLSEKADIYSYGVVVLEIISGQRSKELTIDGDAEGEFLLQKVRKFPAFSKNTLLC 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1040 439 ProSiteProfiles Protein kinase domain profile. 108 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1040 439 FunFam Cysteine-rich receptor-like protein kinase 2 145 249 - -
Mibi08g1040 439 ProSiteProfiles Gnk2-homologous domain profile. 143 249 IPR002902 -
Mibi08g1040 439 Pfam Salt stress response/antifungal 150 246 IPR002902 -
Mibi08g1040 439 Pfam Salt stress response/antifungal 46 133 IPR002902 -
Mibi08g1040 439 Gene3D - 143 249 IPR038408 -
Mibi08g1040 439 Gene3D - 30 137 IPR038408 -
Mibi08g1040 439 Gene3D Phosphorylase Kinase; domain 1 309 350 - -
Mibi08g1040 439 Pfam Protein kinase domain 347 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1040 439 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 346 - -
Mibi08g1040 439 SUPERFAMILY Protein kinase-like (PK-like) 346 407 IPR011009 -
Mibi08g1040 439 Gene3D Transferase(Phosphotransferase) domain 1 351 433 - -
Mibi08g1040 439 ProSiteProfiles Gnk2-homologous domain profile. 31 137 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1040 Mibi-ChrMibi08 24259239 24263773 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1040 345 373 Receptor kinase-like Gene Family AT1G70530 68.966 6.85e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1040 Stress-antifung 9.7e-12 No_clan