Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1038 ATGGAGGAAGATTTTGAAAGTGAAGTGAAACTGATAAGTAATGTTCATCATTTAAATCTTGTTCGACTCCTAGGATGCTGCAGCAAAGGGCACAACAGAATTCTTGTCTATGAATACATGAAAAACAAAAGTCTTGACAATTTCTTATTTGGTAAAATGAAGGGCTCTCTCAACTGGAAGCAACGATGTAACATAATTTTGGGAATAGCAAAGGGGTTGACTTATCTGCATGAGGAATTTCACGTTTGTATCATACATAGAGATATAAAGACAAACAACATTCTCTTAGATGATAATATGCAGCCTAAAATTGCTGATTTTGGATTGGTAAGGCTTTTACCTGAGGACAAATCTCATCTCAACACAAAATTTGCCGGAACACTAGGATATACGGCACCTGAGTATCTCATTCATGGCCAATTATCAGAGAAGGCTGATATCTATAGTTATGGTGTTGTGGTCTTGGAAATCATCAGTGGTCGACAAAGTAAAGAATTAACCATCAATGGCGATGCAGAGGGTGAATTCCTCCTTCAAAAAGCTTGGAAATTATATGAGAGAGGCATGCACTTAGAGTTGGTGGACAAGACCTTAGACCCTGAGGAGTATGATGAAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACTCAAGCATCTAGAGAAGCAAGGCCAATGATGTCTGAAGTAGTTGTTTTGCTCCAAAACAAATATTTGTTAGAGAATATGAAGCCCACTATGCCTATCTTAATTGAAACTAATTAG 771 0.3735 MEEDFESEVKLISNVHHLNLVRLLGCCSKGHNRILVYEYMKNKSLDNFLFGKMKGSLNWKQRCNIILGIAKGLTYLHEEFHVCIIHRDIKTNNILLDDNMQPKIADFGLVRLLPEDKSHLNTKFAGTLGYTAPEYLIHGQLSEKADIYSYGVVVLEIISGRQSKELTINGDAEGEFLLQKAWKLYERGMHLELVDKTLDPEEYDEEEVKKIIEIGLLCTQASREARPMMSEVVVLLQNKYLLENMKPTMPILIETN 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1038 256 ProSiteProfiles Protein kinase domain profile. 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1038 256 SUPERFAMILY Protein kinase-like (PK-like) 2 236 IPR011009 -
Mibi08g1038 256 FunFam Cysteine-rich receptor-like protein kinase 2 40 244 - -
Mibi08g1038 256 PIRSF ILK 1 246 - -
Mibi08g1038 256 Gene3D Transferase(Phosphotransferase) domain 1 41 247 - -
Mibi08g1038 256 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 3 254 - -
Mibi08g1038 256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 84 96 IPR008271 GO:0004672|GO:0006468
Mibi08g1038 256 SMART serkin_6 3 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1038 256 Gene3D Phosphorylase Kinase; domain 1 1 40 - -
Mibi08g1038 256 Pfam Protein tyrosine and serine/threonine kinase 3 234 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1038 Mibi-ChrMibi08 24201289 24202904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1038 4 254 Receptor kinase-like Gene Family AT1G70520 48.249 1.63e-76 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1038 PK_Tyr_Ser-Thr 4.5e-43 CL0016