Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1035 ATGTTTCAACATTCTTATCCCCTTACCTTATTTGCTTTCATATTATGGTCAAGCTTTGCTCTTGACGGCATCGTTTCAGACCCACAGACTCATCTTCTTACCATTGGGTGCACCCCATTCGACCCCTTTGTCGTTTCTAACACGTCCATCTTCATCGACAACCTAAACGCGACGTTTCAAGACATCAGAGAACAGGTTAGAGAACAGAACAATCGCTTCGCTATAGTTCAGGAAAGTAGTGGAGGAAGCCCCGTCTCCACTCTTTTTCAATGCAGAAACTATCTCTCCATCGCCGACTGTCTCGCGTGCTTCGATGTAGCCGCCGTCAAAGTCCGAAGTTGTCCCGCGGGTGGCCCTGGTGGCCATGTCGTCTACGACGGCTGCTTCCTCAGGTATGATGCTAGTCCTTTCTTTGATCGACCAACGGATACTTTTAATGCTGCATTGTGCGGGAAGAACACTACAGGAGAAGCCACTGCATTTACATCAGCTGTGCGAAAAATGCTAATGAATCTCCAAAACAAAGCAGCGACAATGGGAGGTGTTTTTGCAGCCACGAAGACACAAGTGCCTAATAATGGTCCAAATATATATGCCTATGTTCAGTGCACAAAAACTATCACACAAAGTGGATGTCTCGATTGCTTAAGTGTTGGATATAAAAATATGCAGACTTGTCTTCCCACTTCAGATGGTAGAGCTTTTGATCAGGGTTGTTTCATGAGATACTCCACAACTTCCTTCTTTCCTGATAACCAGATCATTGATGTCACTCCCATGGATAAACAAGGTTCAAGTAATAAGGGGGCCATCATCGGCGGAGTTGTTGGAGGAGCATTGTTGCTTGTTTTGGTCGCCCTTGTACTTTTTGTTTGGACTAAACCACCAAAAGGCCCTGGAAGGGTTCCGGCTGGAGGAGACATAACTGGTACAAGCAAGTTGAAAGGTGCAATTAATTACAGTTATATGGATTTGAAGTTTGCAACCAAAAATTTTAGTGCAGAAAATAAACTAGGAGAAGGAGGATTTGGTGCAGTATATAAGAACAAATCTCATTTTAGCACGAGATTTGCTGGAACATTAGGATATGCAGCACCTGAGTATGCGATACATGGCCAATTATCTGAGAAGGTTGACATCTACAGTTATGGTGTTGTCGTTTTAGAAATTATAAGTGGTAAAAAAAGTGAAGAATTGAATGTGAATGGTGAAGCTGAAGGTGAATTCCTCCTTCAAAAGGCATGGAAACTATATGAAAGAGGCACTCATTTAGAGTTGGTGGACACTACTTTAGACCCTAATGAATATGATGTGGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACCCAAGCATCAGCCGCAATAAGGCCCACAATTTCTGAAGTAGTTGTCTTGCTCCAAAACAAGGGTTCTTATGAAAATATGAAACCAACTATGCCTTTCTTAGTTGAAACTAAATAG 1470 0.4245 MFQHSYPLTLFAFILWSSFALDGIVSDPQTHLLTIGCTPFDPFVVSNTSIFIDNLNATFQDIREQVREQNNRFAIVQESSGGSPVSTLFQCRNYLSIADCLACFDVAAVKVRSCPAGGPGGHVVYDGCFLRYDASPFFDRPTDTFNAALCGKNTTGEATAFTSAVRKMLMNLQNKAATMGGVFAATKTQVPNNGPNIYAYVQCTKTITQSGCLDCLSVGYKNMQTCLPTSDGRAFDQGCFMRYSTTSFFPDNQIIDVTPMDKQGSSNKGAIIGGVVGGALLLVLVALVLFVWTKPPKGPGRVPAGGDITGTSKLKGAINYSYMDLKFATKNFSAENKLGEGGFGAVYKNKSHFSTRFAGTLGYAAPEYAIHGQLSEKVDIYSYGVVVLEIISGKKSEELNVNGEAEGEFLLQKAWKLYERGTHLELVDTTLDPNEYDVEEVKKIIEIGLLCTQASAAIRPTISEVVVLLQNKGSYENMKPTMPFLVETK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1035 489 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Mibi08g1035 489 Coils Coil 52 72 - -
Mibi08g1035 489 Pfam Protein kinase domain 336 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1035 489 Gene3D - 40 137 IPR038408 -
Mibi08g1035 489 Gene3D - 142 248 IPR038408 -
Mibi08g1035 489 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Mibi08g1035 489 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 349 - -
Mibi08g1035 489 FunFam Cysteine-rich receptor-like protein kinase 2 145 248 - -
Mibi08g1035 489 Gene3D Transferase(Phosphotransferase) domain 1 322 481 - -
Mibi08g1035 489 SUPERFAMILY Protein kinase-like (PK-like) 352 471 IPR011009 -
Mibi08g1035 489 Pfam Salt stress response/antifungal 47 133 IPR002902 -
Mibi08g1035 489 Pfam Salt stress response/antifungal 154 245 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1035 Mibi-ChrMibi08 24172244 24176890 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1035 337 469 Receptor kinase-like Gene Family AT1G56120 48.507 5.93e-34 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1035 Pkinase 4e-08 CL0016