Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1034 ATGAAACCCATCATAAGACAAAACCCTTTCTTGTTCTTATTGTTGAGCTTCATAATCTGGTCATGGTGGAGTCTAGACGGCGTCGTTTCAGACCCACAGACCAATTTCGTGAAGATAGGATGCAGCCAATACAATGTAACAGACACGAAAATCTTCCATGATAATCTGAAGATAACATTCAGAGACATGAAAGCACAGATCAAGAACCAAAGCAAACACTTTGCCACATCTCAGGCAGTGAAGGGGAACAATCCAGCTTATAGTATTTTTCAGTGCAGAAACTACCTCTCCATCTCCGACTGCCTCGCTTGCTTCCGAGTCGCCGCCCGGAATATTCGCAACTGCTCTTACAGTGCCACCGGTGCCCGTATTATTTATGAAGGATGTTTCCTCAGGTACGAGAGCAGCGGTTTCTTTGACCAGAACACAGACGCAGGCAACAACATTGTGTGTGGGAATAAAACAGGAAACACTACTGGACTTGCTTCAACTGTACAACAAGTGCTCAATAATCTGGAAATAGCAACACCAAAAATACCTAATTTCTATGCAGCCACTAAAACACAAGTGCCCAATACTAACACCTCAATTTATGCCTTTGCTCAATGTCTTGAAACTCTCACGCAAAGTGACTGCCAAGATTGCTTGAAGATTGGAGTAAAAAATTTCCAGATATGCCTTCCCAACTCAAACGCTAAGACGTATGATGCAGGTTGTTTCATGAGATACTCCACCACTGCTTTCTTTGCTGATAATCAAACCACTAATATCAAGCACTTCTTGAAACAAGGAGGAGGTTCGACAAAGAAGAAGGCTATTATTGGTGGAGTCGTTGGAGGTGCCTCTGTTATTTTGATTCTTCTTTTATTATTTGCTTTGCATAGACGATCACAGTTATCCAAGAGGGATCGTAGAGGTGACATTTTGGGAGCAACTGAGTTGAAAGGCCCTGTTAACTATAGGTACAAAGATCTAAAGGCAGCAACGAAAAATTTTAATAAAGAAAATAAACTAGGAGAAGGAGGTTTTGGTGATGTTTACAAGGGTACTTTGAAGAATGGAAAAATAGTTGCTGTCAAGAAATTGGCTTTAGACCAATCCAAAGAGATGGAGAAAAATTTTGAAAGTGAGGTGAAGCTTATTAGTAATGTTCATCATCGAAATCTTGTTCGGCTTCTGGGATGTTGCAGCAAAGGACAAGAGAGACTTCTTGTTTATGAGTACATGAAAAACAACAACGTTGGTCAATATTTATTCGGTAAAAATAAAGGTTCTCTCAGTTGGAAGCTACGTTATGGTGTAATTTTGGGTATTGCCAGGGGTTTGGCTTATCTACATGAGGAATTCCATGTTTGTATCATACATAGAGACATAAAAACTAGCAACATCCTCTTGGATGATGATTTCCAACCTAAAATTGCTGATTTTGGACTAGCAAGGCTTTTGCCAAGAGACCAATCTCATCTCAACACAAGATTTGCAGGAACAATGGGATACACGGCACCTGAATATGCAATGCATGGACAACTATCAGAAAAGGTTGATACTTATAGTTATGGAGTTGTTGTCCTCGAAATCATAAGCGGACAAAAGAGTGGTGAATTGAAGGTTAATAATGAAAGTGAATTACTCCTTCAAAAGGCTTGGAAACTATATGAGAGAGCAATGCACATAGAGTTCGTGGACACAACTTTAGATCCAAGTGAGTATGACGCAGAAGAAGTGAAGAAAATCATAGAGATTGGATTGCTTTGTACTCAAGCATCTCCTGCAGCAAGGCCAACTATGTCTGAAATTGTTGTTATGCTCAAAAGCAAGGGCTTAATGGAGAACAAGAAACCCACCATGCCTGTCTATGTTGATCCTACTTGGAAGCCCAAAAGAGACACATCTACTTCTAATAGTTCATCTTCATCAAATGCTACTGTTTCCCGGTCCATTCTATCAGGAAGGTGA 1956 0.4024 MKPIIRQNPFLFLLLSFIIWSWWSLDGVVSDPQTNFVKIGCSQYNVTDTKIFHDNLKITFRDMKAQIKNQSKHFATSQAVKGNNPAYSIFQCRNYLSISDCLACFRVAARNIRNCSYSATGARIIYEGCFLRYESSGFFDQNTDAGNNIVCGNKTGNTTGLASTVQQVLNNLEIATPKIPNFYAATKTQVPNTNTSIYAFAQCLETLTQSDCQDCLKIGVKNFQICLPNSNAKTYDAGCFMRYSTTAFFADNQTTNIKHFLKQGGGSTKKKAIIGGVVGGASVILILLLLFALHRRSQLSKRDRRGDILGATELKGPVNYRYKDLKAATKNFNKENKLGEGGFGDVYKGTLKNGKIVAVKKLALDQSKEMEKNFESEVKLISNVHHRNLVRLLGCCSKGQERLLVYEYMKNNNVGQYLFGKNKGSLSWKLRYGVILGIARGLAYLHEEFHVCIIHRDIKTSNILLDDDFQPKIADFGLARLLPRDQSHLNTRFAGTMGYTAPEYAMHGQLSEKVDTYSYGVVVLEIISGQKSGELKVNNESELLLQKAWKLYERAMHIEFVDTTLDPSEYDAEEVKKIIEIGLLCTQASPAARPTMSEIVVMLKSKGLMENKKPTMPVYVDPTWKPKRDTSTSNSSSSSNATVSRSILSGR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1034 651 ProSiteProfiles Protein kinase domain profile. 332 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1034 651 FunFam Cysteine-rich receptor-like protein kinase 2 146 248 - -
Mibi08g1034 651 Pfam Protein kinase domain 332 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1034 651 Pfam Salt stress response/antifungal 159 245 IPR002902 -
Mibi08g1034 651 Pfam Salt stress response/antifungal 41 135 IPR002902 -
Mibi08g1034 651 MobiDBLite consensus disorder prediction 619 651 - -
Mibi08g1034 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Mibi08g1034 651 SUPERFAMILY Protein kinase-like (PK-like) 320 637 IPR011009 -
Mibi08g1034 651 FunFam Cysteine-rich receptor-like protein kinase 2 409 611 - -
Mibi08g1034 651 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Mibi08g1034 651 FunFam Cysteine-rich receptor-like protein kinase 2 298 408 - -
Mibi08g1034 651 Gene3D Phosphorylase Kinase; domain 1 296 408 - -
Mibi08g1034 651 ProSiteProfiles Gnk2-homologous domain profile. 34 138 IPR002902 -
Mibi08g1034 651 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 637 - -
Mibi08g1034 651 SMART serkin_6 332 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1034 651 Gene3D - 33 138 IPR038408 -
Mibi08g1034 651 Gene3D - 146 248 IPR038408 -
Mibi08g1034 651 Gene3D Transferase(Phosphotransferase) domain 1 409 617 - -
Mibi08g1034 651 CDD STKc_IRAK 338 604 - -
Mibi08g1034 651 MobiDBLite consensus disorder prediction 626 651 - -
Mibi08g1034 651 ProSitePatterns Protein kinases ATP-binding region signature. 338 361 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1034 Mibi-ChrMibi08 24133745 24139223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1034 10 651 Receptor kinase-like Gene Family AT1G70520 35.846 1.21e-128 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1034 Pkinase 5e-52 CL0016