Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1033 ATGAGAACACAAATTAGCAATCAAAGCAAACACTTCGCCACAGAGAGCATAGTAAAGGGTAACAATCCAGCTTATGGTCTTTTTCAGTGCAGGAATTACCTCTCCATCGCCGACTGTCTCGCTTGCTTAGACGTCGCCGACAATAAGGTCCGGCGCAACTGCTCCGCCGCCTCCAACGGTGCCCATGCCATATACGATGGTTGTTTCCTCAGATACGAGAGCAGTACCTTCTTTGAGCAGTCTACGGACCCAGTAAACAACGTTCGTTGTGGGAATGCAACAAAAAATTCCACAGAACTTGCTTCAACTGTGCAACTAGTGCTAAAGGATCTTGAAATGGCAACACCAAGAATCAATAATTACTATGCAGCCACTAAAACAACAGTGCCTAACAGTAACGGCTCCAACATTTATGCCTTTGCTCAATGTGTTGAGAATCTCACACAAAGTGGTTGTGACAATTGCTTGAACATCGCCTTAAGAAACTTTCAGCTGAATTGTATCCCAAACTCAGATGCTAAGGCTTTTGATTTTGGATGCTTCATGAGATATTCCACCTCTGCTTTCTTTGCTGATAATCAAACCATTAATATCAATCATTTCTTGAATCCAGGAGATTCAAGCAAGAAGAAGGCCATCATTGGCGGAGTCGTTGGAGGAGTATCTTTTGTTTTGATTCTCCTGGCATTATTGGCTTTGTATATGCGATCACAGTCAGCCAAGATGGCTCCTAAAGGTGACATTTTGGGAGCAACTGAACTAAAAGGTCCTGTAAACTTTAGATATAAGGATCTAAAGTCAGCGACAAAAAATTTCAGTGAAAAAAATAAAATGGGAGAAGAAGGTTTTGGTGATGTATACAAGGGTACTCTAAAAGATGGAAAAGCAGTTGCTATCAAGAAATTGGATTTAGGTCAATCCAAACAGATGGAGAAAGATTATGAGAGTGAAGTGAAGTTGATGAGTAATGTTCATCATCGGAATACTATTAGGCTTCTGGGATGTTGCAGTAAAGGCCAAGAGAGATTTCTTGTTTATGAGTACATGAAAAACAACAATGTTGTCCAACTCTTAAGTGGTGAAAATAAAGGTTCTCTCAGTTGGATGCAGCGTTATGGAATAATTTTGGGCACTGCAAGAGGTTTGGCATATCTACATGAGGAGTTTCATGTTTGTATCATACATAGAGATGTAAATATTAGCAATATCCTCTTGGATGATGATTTTCAACCAAAAATTGCTGATTTTGGATTGGCAAGGCTTTTGCCAAGAAACCAATCTCATCTCAATACACAATTTGCTGGAACAACGGGATACGTGGCACCTGAATATGCAATGTATGGACAATTATCAGAGAAAGTTGATACTTATAGTTATGGTGTTGTTGTCCTAGAAATCATAAGCGGACAAAAGAGCACTACATCAAAGGTTGATGATAAAGGAGAATACCTCCTTCAAAAAGCTTGGAAACTGTATGAGAGAGGAATACATTTAGAGTTTGTGGACAAAAGCTTAGATCCAAATGAGTATGATGCAGAAGAAATAAAGAAAATCATAGAGATTGGATTGCTTTGCACTCAAGCATCTCCTTCTGCAAGGCCAAAAATGTCTGAAATTGTGAGAATGCTCAAAAGAAAGAGCTTAATGGAACACCAACAACCCACTATGCCTGTTTATGTTGATCCTATTTCTTCGTCCAAAAGAGAAGACAGCTCTATGACTGACGTTTCATCTTCTTCAAATGCTACTGCCTCCATTTCCATTCTGTCAGGAAGGTGA 1779 0.3963 MRTQISNQSKHFATESIVKGNNPAYGLFQCRNYLSIADCLACLDVADNKVRRNCSAASNGAHAIYDGCFLRYESSTFFEQSTDPVNNVRCGNATKNSTELASTVQLVLKDLEMATPRINNYYAATKTTVPNSNGSNIYAFAQCVENLTQSGCDNCLNIALRNFQLNCIPNSDAKAFDFGCFMRYSTSAFFADNQTININHFLNPGDSSKKKAIIGGVVGGVSFVLILLALLALYMRSQSAKMAPKGDILGATELKGPVNFRYKDLKSATKNFSEKNKMGEEGFGDVYKGTLKDGKAVAIKKLDLGQSKQMEKDYESEVKLMSNVHHRNTIRLLGCCSKGQERFLVYEYMKNNNVVQLLSGENKGSLSWMQRYGIILGTARGLAYLHEEFHVCIIHRDVNISNILLDDDFQPKIADFGLARLLPRNQSHLNTQFAGTTGYVAPEYAMYGQLSEKVDTYSYGVVVLEIISGQKSTTSKVDDKGEYLLQKAWKLYERGIHLEFVDKSLDPNEYDAEEIKKIIEIGLLCTQASPSARPKMSEIVRMLKRKSLMEHQQPTMPVYVDPISSSKREDSSMTDVSSSSNATASISILSGR 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1033 592 MobiDBLite consensus disorder prediction 558 592 - -
Mibi08g1033 592 SUPERFAMILY Protein kinase-like (PK-like) 254 543 IPR011009 -
Mibi08g1033 592 FunFam Cysteine-rich receptor-like protein kinase 2 349 551 - -
Mibi08g1033 592 FunFam Cysteine-rich receptor-like protein kinase 2 238 348 - -
Mibi08g1033 592 CDD STKc_IRAK 278 545 - -
Mibi08g1033 592 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 26 577 - -
Mibi08g1033 592 ProSiteProfiles Protein kinase domain profile. 272 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1033 592 Gene3D Transferase(Phosphotransferase) domain 1 349 561 - -
Mibi08g1033 592 Gene3D - 1 77 IPR038408 -
Mibi08g1033 592 Gene3D - 85 189 IPR038408 -
Mibi08g1033 592 MobiDBLite consensus disorder prediction 565 592 - -
Mibi08g1033 592 Pfam Salt stress response/antifungal 10 74 IPR002902 -
Mibi08g1033 592 Pfam Salt stress response/antifungal 95 186 IPR002902 -
Mibi08g1033 592 Pfam Protein kinase domain 273 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1033 592 Gene3D Phosphorylase Kinase; domain 1 237 348 - -
Mibi08g1033 592 ProSiteProfiles Gnk2-homologous domain profile. 1 77 IPR002902 -
Mibi08g1033 592 ProSiteProfiles Gnk2-homologous domain profile. 82 189 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1033 Mibi-ChrMibi08 24080918 24085319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1033 1 592 Receptor kinase-like Gene Family AT1G70520 35.284 3.22e-118 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1033 Pkinase 8.6e-47 CL0016