Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1032 ATGCGGCCAAAACTACAACAAAGGCCTTTGTTTTTCTTCTTCATCTTGAACTTCATAATCTGGTCATGGTGGACACTTAACGGCGTCGTTTCAGACCCTCAGACCAATCCGGTGGCGCTATGGTGTGACCAAGACGGTGACAATGATGGGACCATAATGAAAGATATCCTAAACGAAACGTTTGGAAATCTGAGGGCTCAGATCGAAAGCCAAAACAAACACTTCGCCACAGCTCAAGCAGTGAAGTCTAACATCCCTGTTTATGGCCTTTTTCAGTGCAGAAACTATCTCTCCATCTCCGATTGCCTCGCTTGCTTCGATGTCGCCGCCGTGAACATCCGTAACTGCTCCGATAGGGCATACGGTTCCCGTCTCGTCTACGACGGCTGCTTCCTCAGGTATGAGAGCAGTCCACAATTTGATTGGACCAGCGAAACTTGGGGCAACATAAGATGTGGGAATCAGACAATAAGAGATTCCTCAGCCCTTGCTTCAACTGTACAACAAGTGTCAACGAATCTAATCACAGCAACCCCAAGAATGGCTGAATTCTATGCGGCCACTAAAACGCCTTTGCCTAATAGTAATGGTTTAAACATTTATGCGATTGCTCAATGTGTTTGGACTCTCTCATCAAGTGGGTGTCAGAATTGCTTAAACTCTGCCTCAGCCAAATTTCAGACTTGTCTTCCAAACTCAAATGCTGAGAGTTATGACACTGGCTGTTTCATGAGATACTCCACCACTTCCTTCTTTGCTGATAATCAAACCACTGATATCAACCCCTTCTTGAAACAGCAAGCAGGTTCAAGCAACAGTAAGGGGGCTATAATTGGTATTGTTATTGGAAGTGTAGTGTTTGTTTTGATCCTCCTTATTGCATTATTTGTCTGGATTAGACCACGAAAGCGCCAAAAGAGATTTCCCAGAGGAGACATGACTGGAATAAGCAAGTTGAAAGCCCCAGTTAGCTACGATTATAGGGATTTGAAGTCCGCTACACAAAATTTCAGTACTGAAAATAAACTTGGGGAAGGAGGATTTGGTGCAGTTTATAAGGGCACTCTGAAGAATGGGAAAGTAGTTGCAGTGAAGAAATTAACTTTACGAAAATCAAAGAGGTTGGATGAAGAATTTGAAAGTGAAGTAATGCTTATTAGTAATGTTCATCATCGGAATCTTGTTCGACTTCTTGGATGTTGCAGCAAAGGCAACGAGAGGATTCTGGTCTACGAATACATGGAAAAAACCAGTCTTGACAGATTCTTATTCGGAAAAAGGAAAGGTTCTCTTAATTGGAAGCAACGGTACGATATAATTTTAGGAACAGCCAGAGGTTTGACTTATCTACATGAAGAATTTCATGTTCGAATCATACACAGAGATATAAAGACTAACAATATATTGCTAGATGATGATCTGCAACCTAAAATTGCTGATTTTGGTTTAGCAAGGCTCTTACCTGAGGATAAGTCTCATCTTAGTACAAGATATGCAGGAACGTTAGGATATACCGCTCCAGAGTACGCAATTCATGGCCAATTATCAGAGAAGGTTGATGTCTATAGCTATGGTATTGTAGTCCTAGAAATTATTAGTGGTAGAAGAAACAATGAGTTAAAGGTCAAAGGTGTTGTTGAAGGTGAATTCCTCCTTCAAAAGGCTTGGAAACTGTATCAAAGAGGCATGCACTTAAATTTGGTGGATGACACATTGGAACCTAATGAGTATGATGCAAAAGAAATGAAGAAAATCATAGAGATTGGTTTGCTTTGCACCCAAGCATCTGCAGAAATCAGGCCAAGGATGTCTGAAGTAGTTGGTTTGCTCCAAAATGAAGATTTAGCAGAGAATATAAGACCCACTATGCCTGTTTTAATTGAAATTGATTAG 1893 0.411 MRPKLQQRPLFFFFILNFIIWSWWTLNGVVSDPQTNPVALWCDQDGDNDGTIMKDILNETFGNLRAQIESQNKHFATAQAVKSNIPVYGLFQCRNYLSISDCLACFDVAAVNIRNCSDRAYGSRLVYDGCFLRYESSPQFDWTSETWGNIRCGNQTIRDSSALASTVQQVSTNLITATPRMAEFYAATKTPLPNSNGLNIYAIAQCVWTLSSSGCQNCLNSASAKFQTCLPNSNAESYDTGCFMRYSTTSFFADNQTTDINPFLKQQAGSSNSKGAIIGIVIGSVVFVLILLIALFVWIRPRKRQKRFPRGDMTGISKLKAPVSYDYRDLKSATQNFSTENKLGEGGFGAVYKGTLKNGKVVAVKKLTLRKSKRLDEEFESEVMLISNVHHRNLVRLLGCCSKGNERILVYEYMEKTSLDRFLFGKRKGSLNWKQRYDIILGTARGLTYLHEEFHVRIIHRDIKTNNILLDDDLQPKIADFGLARLLPEDKSHLSTRYAGTLGYTAPEYAIHGQLSEKVDVYSYGIVVLEIISGRRNNELKVKGVVEGEFLLQKAWKLYQRGMHLNLVDDTLEPNEYDAKEMKKIIEIGLLCTQASAEIRPRMSEVVGLLQNEDLAENIRPTMPVLIEID 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1032 630 FunFam Cysteine-rich receptor-like protein kinase 2 302 413 - -
Mibi08g1032 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Mibi08g1032 630 Gene3D - 38 138 IPR038408 -
Mibi08g1032 630 Gene3D - 146 251 IPR038408 -
Mibi08g1032 630 FunFam Cysteine-rich receptor-like protein kinase 2 414 618 - -
Mibi08g1032 630 SUPERFAMILY Protein kinase-like (PK-like) 322 617 IPR011009 -
Mibi08g1032 630 SMART serkin_6 337 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1032 630 ProSitePatterns Protein kinases ATP-binding region signature. 343 366 IPR017441 GO:0005524
Mibi08g1032 630 Gene3D Phosphorylase Kinase; domain 1 302 413 - -
Mibi08g1032 630 ProSiteProfiles Gnk2-homologous domain profile. 145 251 IPR002902 -
Mibi08g1032 630 Gene3D Transferase(Phosphotransferase) domain 1 414 621 - -
Mibi08g1032 630 Pfam Protein kinase domain 338 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1032 630 CDD STKc_IRAK 343 612 - -
Mibi08g1032 630 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 625 - -
Mibi08g1032 630 ProSiteProfiles Protein kinase domain profile. 337 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1032 630 Pfam Salt stress response/antifungal 54 136 IPR002902 -
Mibi08g1032 630 Pfam Salt stress response/antifungal 156 248 IPR002902 -
Mibi08g1032 630 ProSiteProfiles Gnk2-homologous domain profile. 35 139 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1032 Mibi-ChrMibi08 24070081 24074634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1032 9 628 Receptor kinase-like Gene Family AT1G70520 36.884 5.52e-123 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1032 Pkinase 7.8e-50 CL0016