Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1031 ATGGTGCTAAACCTGCAACAAAAACCCTTGTTCTTGACATTTTGTTCCATCTTCATAATTTGGTCATGGTGGACTCTAGATGGCGTCGTTTCAGACCCACAACTCAGCTATGTGAAATCAGGTTGCAGCGGCTATAACGCTTCTAACGTGATCATCTTTAATGAGAACGTCAACGCAACGATGAGAAGCCTGAGAGAACAAGTCAGCAACCAAAGCAAACACTCTGCCACGGCCATGGCTGTGAAAAGTAACAATCCGGTGTACGGCGTTTTTCAGTGTCGGAATTATCTCTCTATCAAAGACTGCCTCGCTTGCTTCGACTTCGCCGTTGTTCATATCTACGAGTACAACTGCTCCGTCGCTGCCAACGGTGCCCGTGTCATCTATGAAGGTTGCTTCCTCAGGTTTGAGAGCAGCTATTTCTTTGACCAGTCCATAGACGCTGGGAACCACATTATGTGTGGGAATGGTACGGCTAAAAACTCCACTGAACTTGCTTCAACTGTACAACAGGTGCTGAACAATCTGGTAGAAGCAACACCAAGAATACCTGATTTCTTTGCGGCCACTATAACAACAGTACCTAACAGTAATGGTTCAAATATTTATGCCATTGCTCAATGTCTCAAGACTGTCACTCAAAGTGGCTGCCAGGATTGCTTGGAGTCTGGTTTAAGAAATTTTCAGATTTGTATTCCCAACTCGAATGCCAAGATTTTTTATGCTGGCTGTTTCATGAGATACTCCACCTCTGAATTTTTTGCTCAAAACCAGACCACTGATCTCAAGCACATCTTAAACCAAGGAGATTCTAGCAAGAAGAAGGCCATTATTGGTGGAGTCGTTGGAGGAGTATTTTTTATTTTGATTCTCCTTGCATTATTAGCTTTGTATAGACGATCGTTATCCAAGAGGGTACACAGAGTTGACATTTTGGGAGCAACTGATTTGACAGGCCCGGTTAACTATAGATATAAAGATCTAAAGTCTGCAACAAAAAATTTCAGTAAAGAGAATAAATTAGGAGAAGGAGGTTTTGGAGATGTATACAAGGGTACCCTGAAAAATGGAAAAGTAATAGCTATAAAGAAATTGGCTTTAGAGCAATCCAAAAAGATGGAGGAAGATTTTGAAAGTGAAGTGAGGCTAATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTCGGTTGTTGCAGCAAAGGCCGAGAGAGATTCCTTGTGTATGAGTACATGAAGCATAACAATATTGGGCAATTCTTATTTGGTGAAAATAAAGGTTCTCTCAATTGGAAGCAACGTTATGGTATAATTTTAGGCGCTGCAAGGGGTTTGGCATATCTTCATGAGGGATTCCACATGTGCATCATACATAGAGATATAAAGCCTAACAACATCCTCTTGGATGATGATTTCCAGCCTAAAATTGCAGATTTTGGATTGGCAAGGCTTTTGCCAAGTGACCAATCTCATGTCAGTACAAAATTTGCAGGGACAATGGGATACACGGCACCTGAGTATGTAATGCATGGACAATTATCAGAGAAGGTTGATACCTATTGTTATGGTGTTGTAGTCTTAGAAATCATAAGTGGGCAAAAGAGTGGTGAATTAAAGGATGGTGATGAAGGTGAATTCCTCCTTCAAAGAGCTTGGAAATTGTATGAGAGAGGAATGCACATAGAGTTTGTTGACGAAACCTTAGATCCAAATGAGTATGATGCAGAAGAAATGAAGAAAATCATAGAGATTGGACTGCTTTGCACACAAACATCTCCTGCATCAAGGCCAACAATGTTTGAAGTTGTCGATATGATCGAAAGCAAGGGTGAGTTAACAGATCAAAAGCGAGCCACTATGCCTGTCTATGTTGATCCTAATTTGAGGCCTAAAAGTGATGGTGAATCTAGTAGTTCATTTCTATCAACTGCTACTGTCTCCACTTCTATTCCATCAGGAAGGTGA 1965 0.4092 MVLNLQQKPLFLTFCSIFIIWSWWTLDGVVSDPQLSYVKSGCSGYNASNVIIFNENVNATMRSLREQVSNQSKHSATAMAVKSNNPVYGVFQCRNYLSIKDCLACFDFAVVHIYEYNCSVAANGARVIYEGCFLRFESSYFFDQSIDAGNHIMCGNGTAKNSTELASTVQQVLNNLVEATPRIPDFFAATITTVPNSNGSNIYAIAQCLKTVTQSGCQDCLESGLRNFQICIPNSNAKIFYAGCFMRYSTSEFFAQNQTTDLKHILNQGDSSKKKAIIGGVVGGVFFILILLALLALYRRSLSKRVHRVDILGATDLTGPVNYRYKDLKSATKNFSKENKLGEGGFGDVYKGTLKNGKVIAIKKLALEQSKKMEEDFESEVRLISNVHHRNLVRLLGCCSKGRERFLVYEYMKHNNIGQFLFGENKGSLNWKQRYGIILGAARGLAYLHEGFHMCIIHRDIKPNNILLDDDFQPKIADFGLARLLPSDQSHVSTKFAGTMGYTAPEYVMHGQLSEKVDTYCYGVVVLEIISGQKSGELKDGDEGEFLLQRAWKLYERGMHIEFVDETLDPNEYDAEEMKKIIEIGLLCTQTSPASRPTMFEVVDMIESKGELTDQKRATMPVYVDPNLRPKSDGESSSSFLSTATVSTSIPSGR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1031 654 Gene3D - 34 141 IPR038408 -
Mibi08g1031 654 Gene3D - 149 253 IPR038408 -
Mibi08g1031 654 Pfam Protein kinase domain 335 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1031 654 ProSiteProfiles Protein kinase domain profile. 335 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1031 654 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Mibi08g1031 654 FunFam Cysteine-rich receptor-like protein kinase 2 303 411 - -
Mibi08g1031 654 Gene3D Phosphorylase Kinase; domain 1 299 411 - -
Mibi08g1031 654 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 631 - -
Mibi08g1031 654 ProSiteProfiles Gnk2-homologous domain profile. 35 141 IPR002902 -
Mibi08g1031 654 ProSiteProfiles Gnk2-homologous domain profile. 147 253 IPR002902 -
Mibi08g1031 654 Pfam Salt stress response/antifungal 154 250 IPR002902 -
Mibi08g1031 654 Pfam Salt stress response/antifungal 46 138 IPR002902 -
Mibi08g1031 654 MobiDBLite consensus disorder prediction 617 654 - -
Mibi08g1031 654 CDD STKc_IRAK 341 607 - -
Mibi08g1031 654 FunFam Cysteine-rich receptor-like protein kinase 2 412 614 - -
Mibi08g1031 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Mibi08g1031 654 MobiDBLite consensus disorder prediction 631 654 - -
Mibi08g1031 654 FunFam Cysteine-rich receptor-like protein kinase 2 149 253 - -
Mibi08g1031 654 Gene3D Transferase(Phosphotransferase) domain 1 412 635 - -
Mibi08g1031 654 SMART serkin_6 335 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1031 654 SUPERFAMILY Protein kinase-like (PK-like) 319 607 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1031 Mibi-ChrMibi08 24056792 24063077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1031 9 654 Receptor kinase-like Gene Family AT1G70520 36.432 7.34e-126 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1031 Pkinase 2.3e-50 CL0016