Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1030 ATGCTTCAACGTCCTCATCTCCTTCCCTTGTTAACTATCTTCATATTTTGCTGCTCATGCTGCCTCATCCTTAACGGCGTCGTTTCAGAGCCACAGACCAATCTTCTTATGAGTGAGTGCAATCCACTCTTCGTGTACCTCGTGCCCAGTATTTCCATCTTTGATGGTAACCTAAAAACAACGTTGAAACAAATAAGAGAGCAGATTAGTGAACAAAAGAAACATTTTGCAACCTCACAGCAAGGTAATGGAGGAAACCCTGTCTCCACTCTTTTCCAATGCAGAAATTACCTCTCCAACTCCGATTGTCTTGCGTGCTTCGACGTCGCTGCTACACGAATTCTCAGCTGCACCACCGGGTCCTCTGGTGCTCATGTGGTCTACGATGGCTGTTACCTCAGGTTCGACATTAGCAGTTCTTTCCTTCAAGAGACAACACAAACTTTCAACACTGCATATTGCGGTAATCAAACTGAAGGTGGAACCACAACAACATTCGCCTCTGTTGCACAAAAAGTGTTAATGAATCTTCAAACAGCAACGCCTAAGATCAAAGATTCTTTTGCGGTCATGAAGATGACAGTGTCTAGCAATAATGGTCCAACTATTTATGCCGTTGCCCAATGTATTGAAACTATTACACCAAATGATTGCCTCAATTGCTTGAATTCTGGATACAACAACATGCAGACATGTCTTTCCTATTCTGATAATGGAAGGGCTTTTTCTAATGGCTGTTTCATGAGATACTCCACCACTTCCTTCTTTCCAGATAACCAGACCATTGATATCATAATACCCTCTTCCAAACAAGGTTCAAGTAACAAGGAGGCCATTATTGCTGGAGTTGTTTCTAGTGCAGCTCTTGCTTTGATCCTTGTTGTATTATGTGCTTTGATTGGAAGACATAAAAACTCTAAGTGGACTCCTAGAGGAGACACACCTGGGGCGAGCAAGTTGAAAGGCCCAATTACTTATAGTTATAAGGATTTGAAGTCTGCAACCAAAAATTTTAGTAAAGAAAATAAAATAGGAGAAGGTGGATTTGGTGTTGTATACAAGGGCATTTTGAAGAATGGCAAAGTAGTTGCAGTTAAGAAATTAGCTTTACGTCACTCCAACAGGATTGATGAAGAATTTGAGAGTGAAGTGATGTTGATAAGTAATGTTCATCACCGGAACCTTGTTCGACTATTGGGGTGTTGTAATGCAGGCCACAACAGAATCCTTGTTTATGAATATATGAAAAACAACAGCCTTGACGGATTCTTATTTGGAGGAAAGAAAGGTTTTCTCAATTGGAAGCAAAGATATGAAGTGATTTTAGGAACAGCAAAAGGTTTGACTTATCTTCATGAGGAATTTCATATTCGCATTATCCATAGAGATATAAAGACAAATAACATCCTCTTAGATGATGATCTCCAACCAAGAATTGCTGATTTTGGGTTAGCAAGACTCATACCAGAGAATGAAACTCATGTTAGTACAAAATTTGCAGGAACACTAGGATACACAGCACCAGAGTATGCAATTCATGGCCAACTTTCAGAAAAAGCTGACATTTATAGCTATGGCGTTGTAGTCTTAGAAATCATTAGTGGTAAAAAAAGCAGTGAACTAAAGATCCATGGTGATGTTGAAGGGGAATTCCTCCTCCAAAAAGCTTGGAAGCTATACGAGAGGGGCTTGCACTTAGAGTTGGTGGACAATGCCTTAGACCCTAAAGATTATGATGTAAATGAAGTGAAGAAAATCATAGAAATTGGTTTGCTTTGCACCCAAGCATCTGCAGAAATGAGGCCAGCAATGTCTGAAATAGTCGTTATGCTCCAGAAGAAGGACCTATTAGAGAATATAAGGCCAACTATGCCCATCTTGATTGAAACTAGTTAG 1896 0.3998 MLQRPHLLPLLTIFIFCCSCCLILNGVVSEPQTNLLMSECNPLFVYLVPSISIFDGNLKTTLKQIREQISEQKKHFATSQQGNGGNPVSTLFQCRNYLSNSDCLACFDVAATRILSCTTGSSGAHVVYDGCYLRFDISSSFLQETTQTFNTAYCGNQTEGGTTTTFASVAQKVLMNLQTATPKIKDSFAVMKMTVSSNNGPTIYAVAQCIETITPNDCLNCLNSGYNNMQTCLSYSDNGRAFSNGCFMRYSTTSFFPDNQTIDIIIPSSKQGSSNKEAIIAGVVSSAALALILVVLCALIGRHKNSKWTPRGDTPGASKLKGPITYSYKDLKSATKNFSKENKIGEGGFGVVYKGILKNGKVVAVKKLALRHSNRIDEEFESEVMLISNVHHRNLVRLLGCCNAGHNRILVYEYMKNNSLDGFLFGGKKGFLNWKQRYEVILGTAKGLTYLHEEFHIRIIHRDIKTNNILLDDDLQPRIADFGLARLIPENETHVSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGVVVLEIISGKKSSELKIHGDVEGEFLLQKAWKLYERGLHLELVDNALDPKDYDVNEVKKIIEIGLLCTQASAEMRPAMSEIVVMLQKKDLLENIRPTMPILIETS 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1030 631 SMART serkin_6 338 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1030 631 Gene3D - 146 255 IPR038408 -
Mibi08g1030 631 Gene3D - 33 139 IPR038408 -
Mibi08g1030 631 FunFam Cysteine-rich receptor-like protein kinase 2 304 414 - -
Mibi08g1030 631 ProSiteProfiles Gnk2-homologous domain profile. 33 140 IPR002902 -
Mibi08g1030 631 ProSiteProfiles Protein kinase domain profile. 338 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1030 631 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Mibi08g1030 631 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 91 629 - -
Mibi08g1030 631 Gene3D Phosphorylase Kinase; domain 1 306 414 - -
Mibi08g1030 631 ProSiteProfiles Gnk2-homologous domain profile. 148 255 IPR002902 -
Mibi08g1030 631 Pfam Salt stress response/antifungal 154 252 IPR002902 -
Mibi08g1030 631 Pfam Salt stress response/antifungal 52 136 IPR002902 -
Mibi08g1030 631 Gene3D Transferase(Phosphotransferase) domain 1 415 621 - -
Mibi08g1030 631 Pfam Protein kinase domain 338 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1030 631 SUPERFAMILY Protein kinase-like (PK-like) 321 619 IPR011009 -
Mibi08g1030 631 CDD STKc_IRAK 344 613 - -
Mibi08g1030 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Mibi08g1030 631 FunFam Cysteine-rich receptor-like protein kinase 2 415 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1030 Mibi-ChrMibi08 24046916 24053260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1030 5 629 Receptor kinase-like Gene Family AT1G70520 35.535 2.58e-116 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1030 Pkinase 3.1e-48 CL0016