Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1027 ATGCAACAAAAACCTTTCTCCTTCCTGTTATTGAGCTTCATAATATGGTCATGGTGGAGTCTAAACGTCGTCATTTCAGACCCACAGACAAACTATGTGAAATTAGGGTGCAGCCAATATAACGTCACAGATGTGACCATCTTCCATAGGAACCTAAACGCTACGTTTAGAGATCTGAAAAATCAGATTGGTAACCAAAGCAAACACTTTGCTACAGCTCAAGCAGTAAATGGTAACAACCCAGCTTATGGCCTTTTTCAGTGTAGAAACTATCTCTCCATCTCCGATTGCCTCAAGTGCTTCGACTTCGCTGCCGATCACATTCGCAATTGCTCCGTTGGCGTCACCGGTGCTCGGATCATCTATGAAGGTTGCTTCCTCAGGTACGAGAGCAGTGGCTTCTTTGACCAGAACACAGACGCTGGTAACAATATTGTGTGTGGGAATAAAGTAAGAAACTCCACTGAACTTGCTACAACAGTGGAACAAGTGCTAACAAATCTGGGAATAGCAACACCAAAAATAAATGATTACTATGCAGCCACTAAAACACCAGTGCCTAACAGTAATGGCTCAAGCATTTATGCCTTTGCTCAATGTCTCGAGACTCTCACTCCAAGTAGCTGCCAGGATTGCTTGAATACTGGCTTAAAAAATTTCCAGATATGTCTTCCCAACTCAAATGCAAAGACATATGATGCTGGCTGTTTCATGAGATACTCCACCACTGCTTTCTTTGCTGATAATCAAACCATCAATATTAGGCCCTTCTTGAAACAAGGAGGTTCAAGCAAGAAGAAGGCCATTATAGGTGGAGTTGTTGGGGGTGCATCTTTCATTTTGATTCTCGCATTGTTTGCTATATACATACGGTCGACGTCATCCAAAAGAAATCCTAGAGGTGACATTCTGGGTGCAACTGAGTTGAAAGGCCCAGTTAACTATAGGTATAAAGATCTAAAAGCTGCAACAAAAAATTTCAGTAAAGAAAATAAACTAGGAGAAGGAGGTTTTGGTGATGTGTACAAGGGCACTCTAAAAAATGGAAAAATAGTTGCTGTCAAGAAATTAGCTTTGGGCCAATCCAAACAGATGGAGAGAGATTTTGAGAGTGAAGTGAAGTTGATAAGTAATGTCCATCATCGGAATCTTGTTCGACTTCTGGGATGTTGTACTAAAGGCCAAGAGAGATTCCTTGTTTATGAGTACATGAAAAACAACAATGTTGGCCAATTCTTATTTGGTAAAAATAAAGGTTCACTCAATTGGAAGCAACGTTATAGTATAATTTTTGGCACGGCAAGGGGTTTGGCCTATCTACATGAGGAATTCCATGTTTGTATTATTCATAGAGATATCAAAACTACCAATATCCTATTGGATGATGATTTCCAACCTAAAATTGCTGATTTTGGACTGGCAAGGCTTTTGCCAAAGGACCAATCTCATCTCAACACAAAATTTGCAGGAACAATGGGATACACAGCACCTGAATATGCAATGCATGGACAATTATCAGAGAAGGCTGATACTTATAGCTATGGTGTTGTACTTCTAGAAATCATAAGCGGACAAAAGAGTGGTGAATTGAATATTGATGATGCAAGCGAACTCCTCCTTCAAAGAGCTTGGAAACTGTATGACAGAGGAATGCACATAGAGTTTGTGGACAAAACCTTAGATCCAAGTGAGTATGATGCAGAAGAAGTAAAGAAAATCATAGAGATTGGATTGCTTTGCACCCAAGCATCTCCTTCAGCAAGGCCAACAATGTCTGAAATTGTTGTTATGCTCAAAAGCAAGGGCTTAATGGAGAACAAAAAGCCCACTATGCCTGTCTATGTTGATCCTAACTTCAGGCCTAGAACAAATAGCTCTACACCCAATGATTCATCTTCTTCAAATGCTACTGCTTCCATTTCGAGTATATCAGGAAGATGA 1941 0.4024 MQQKPFSFLLLSFIIWSWWSLNVVISDPQTNYVKLGCSQYNVTDVTIFHRNLNATFRDLKNQIGNQSKHFATAQAVNGNNPAYGLFQCRNYLSISDCLKCFDFAADHIRNCSVGVTGARIIYEGCFLRYESSGFFDQNTDAGNNIVCGNKVRNSTELATTVEQVLTNLGIATPKINDYYAATKTPVPNSNGSSIYAFAQCLETLTPSSCQDCLNTGLKNFQICLPNSNAKTYDAGCFMRYSTTAFFADNQTINIRPFLKQGGSSKKKAIIGGVVGGASFILILALFAIYIRSTSSKRNPRGDILGATELKGPVNYRYKDLKAATKNFSKENKLGEGGFGDVYKGTLKNGKIVAVKKLALGQSKQMERDFESEVKLISNVHHRNLVRLLGCCTKGQERFLVYEYMKNNNVGQFLFGKNKGSLNWKQRYSIIFGTARGLAYLHEEFHVCIIHRDIKTTNILLDDDFQPKIADFGLARLLPKDQSHLNTKFAGTMGYTAPEYAMHGQLSEKADTYSYGVVLLEIISGQKSGELNIDDASELLLQRAWKLYDRGMHIEFVDKTLDPSEYDAEEVKKIIEIGLLCTQASPSARPTMSEIVVMLKSKGLMENKKPTMPVYVDPNFRPRTNSSTPNDSSSSNATASISSISGR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1027 646 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Mibi08g1027 646 CDD STKc_IRAK 333 599 - -
Mibi08g1027 646 ProSiteProfiles Gnk2-homologous domain profile. 139 245 IPR002902 -
Mibi08g1027 646 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 84 632 - -
Mibi08g1027 646 MobiDBLite consensus disorder prediction 611 646 - -
Mibi08g1027 646 Gene3D Transferase(Phosphotransferase) domain 1 404 613 - -
Mibi08g1027 646 SUPERFAMILY Protein kinase-like (PK-like) 308 598 IPR011009 -
Mibi08g1027 646 MobiDBLite consensus disorder prediction 619 646 - -
Mibi08g1027 646 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Mibi08g1027 646 FunFam Cysteine-rich receptor-like protein kinase 2 142 245 - -
Mibi08g1027 646 SMART serkin_6 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1027 646 Pfam Protein tyrosine and serine/threonine kinase 329 597 IPR001245 GO:0004672|GO:0006468
Mibi08g1027 646 FunFam Cysteine-rich receptor-like protein kinase 2 294 403 - -
Mibi08g1027 646 Gene3D - 141 245 IPR038408 -
Mibi08g1027 646 Gene3D - 29 134 IPR038408 -
Mibi08g1027 646 FunFam Cysteine-rich receptor-like protein kinase 2 404 606 - -
Mibi08g1027 646 Pfam Salt stress response/antifungal 152 242 IPR002902 -
Mibi08g1027 646 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Mibi08g1027 646 ProSiteProfiles Protein kinase domain profile. 327 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1027 646 Gene3D Phosphorylase Kinase; domain 1 293 403 - -
Mibi08g1027 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1027 Mibi-ChrMibi08 23965851 23972128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1027 1 646 Receptor kinase-like Gene Family AT1G70520 37.104 3.88e-134 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi08g1027 PK_Tyr_Ser-Thr 2.3e-52 CL0016