Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1025 ATGATGCTTTCAACACCAGGGTTGGTCCAGCAGGGACATGAAGGGGAAAAGAAATGTTTGAATTCGGAGTTGTGGCATGCATGTGCTGGACCATTGGTATCCTTACCAATTGCGGGTACTCGTGTTGTTTACTTCCCTCAGGGTCATAGCGAGCAGGTTGCGGCTACAACTAACAGGGAAGTTGATGGGCATATGCCTGATTATCCAAACTTGCTACCCCAGTTGATTTGCCAACTTCATAATGTTACAATGCACGTGAATGTTGAAACAGATGAAGTGTATGCTCAAATGACTCTGCAGCCGCTGACTCCACAAGAGCAAAAGGAAACTTTTCTTCCCATGGAATTGGGCATAACAAGTAGGCAGCCCTCGAATTATTTTTGCAAGATATTAACAGCAAGTGACACCAGCACACATGGAGGCTTCTCTGTTCCTCGTCGTGCAGCTGAGAAAGTCTTCCCTCCTCTGGATTACTCTCAGCAACCACCAGCACAAGAACTAATTGCTAGGGATCTCCATGATGTTGAGTGGAAGTTTCGTCACGTTTTTCGGGGACAGCCAAAACGGCACCTTCTTACAACAGGCTGGAGTGTATTTGTTAGTGCCAAGAGACTTGTGGCTGGAGATTCTGTGCTTTTTATATGGAATGAAAAGAATGAGCTTCTTGTGGGAATACGTCATGCCAATCAACGGCAAACTATGATACCTTCATCAGTTCTATCAAGTGATAGTATGCACATTGGATTGCTCGCAGCTGCTGCTCATGCTGCTGCAACTAATAGCTGTTTTACTGTCTTCTATAATCCAAGGGCTTGTCCATCTGAGTTCGTTGTTCCCCTTTCAAAATATATCAAAGCTGTGTATCATACGCGTGTTTCGGTTGGTTTGCGTTTCAGAATGCTATTTGAGACTGATGAATCAAGTGTTCGCCGATACATGGGTACAATAACTGGTATAGGTGATCTGGATCCTGTTCGCTGGCCAAACTCTCACTGGCGATCAGTAAAGGTTGGTTGGGATGAATCAACGGTAGGAGAAAGACAGCCAAGGGTATCATTGTGGGAAATTGAGCCTTTGACAACATTTCCAATGTATCCATCACTATTTCCCCTCAGATTGAAACGCCCATGCTATCCTGGCTCGTCATCTGTGAATGATGGAAGGGATGGTGCTGCTAATGGGCTAATGTGGCTTAGAGGGGAAGCAGGAGAACATAATTTCAACTCTTTAAACTTTCAAAGTGGTGGTGTGTTTCCGTGGATGCAGCAGAAGTTGGATTCAGCATTGTTGGGAAATAATTATAATCAGCAGTACCAAGCATTGTTGGCAGCTGGTTTGCAGAACCCAGGAAATGGAAATCTATTGAGGCAACAAATGCTACATTTTCAACAATCAGGAAACCATAGTCCTTTGCAGCTTCACCAGCAGCAAGCAATTCAGCAATCAGTCCCATCCAATATTCTGCAGCCACAAGCACAGCTGTTGTCAGATAACCTGTCACAGAACCTTTTTCAGAACTCACATAACATTAACAATCAGGCCGACCTTGACCAAGCACATCAGGAGAATAATACTTTTCACAATTCACGCTTGATTCAAAGTGATCAGTTCCATCAGAGGCACCACTCTAATGTGCCTTCATCATCATATTCAAAACCGGATTTCTTAGATTCAAGCATGAAGTTCTCTTCATCAGTTACCCCAACACAAAATGTGCTTGGATCACTGTGTCCTGATGGGAGTGGTAGTGATATTTTAAACCTATCCAGAACTAATCAGTCCATGGTGACTAAACAGGTACCCCAACAATCTTGGACTCTGAAGTATCCACCTGTGCAGGTCAATGCCTTTGGCAATTTGATGTCACAAGCACAGTATAGTGGAAAAGATTCCACATTGGCAGCTCCACATTGTACCTCAGAGAACCAAAATCCAACTCTATTTTGTAATATCAATTCATCTGGTCTTGTGCTCCCAACCACTGTCCCAGGTTACACACCATCAGTTGATAATGATGCTTCAAATATGAAAATAGGGGATTCTGGAATTCAGGGTCATCCATATGCTTGCATGCAAGATTCATCAGAATTATTTCATAGTTCTGGGCAGGTTGACTCACAAAATCAAACCCAGACATTTGTCAAGGTTTACAAATCAGGGTCAGTTGGGCGCTCACTTGACATTTCTCGGTTCAGCAGCTATCATGAACTGAGAGAGGAGTTGGCGCAGATGTTTGGAATTGAGGGGGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGACATGCTTCTCCTTGGCGACGATCCATGGGAATCGTTTGTCAGTAATGTTTGGTACATCAAAATACTTTCACCCGAAGATATCCAGAAAATGGGAGAGCAAGTTGTGGGACTGGAATCCTTGGGTCATAACGCATGA 2436 0.4392 MMLSTPGLVQQGHEGEKKCLNSELWHACAGPLVSLPIAGTRVVYFPQGHSEQVAATTNREVDGHMPDYPNLLPQLICQLHNVTMHVNVETDEVYAQMTLQPLTPQEQKETFLPMELGITSRQPSNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDVEWKFRHVFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNELLVGIRHANQRQTMIPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRACPSEFVVPLSKYIKAVYHTRVSVGLRFRMLFETDESSVRRYMGTITGIGDLDPVRWPNSHWRSVKVGWDESTVGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPCYPGSSSVNDGRDGAANGLMWLRGEAGEHNFNSLNFQSGGVFPWMQQKLDSALLGNNYNQQYQALLAAGLQNPGNGNLLRQQMLHFQQSGNHSPLQLHQQQAIQQSVPSNILQPQAQLLSDNLSQNLFQNSHNINNQADLDQAHQENNTFHNSRLIQSDQFHQRHHSNVPSSSYSKPDFLDSSMKFSSSVTPTQNVLGSLCPDGSGSDILNLSRTNQSMVTKQVPQQSWTLKYPPVQVNAFGNLMSQAQYSGKDSTLAAPHCTSENQNPTLFCNINSSGLVLPTTVPGYTPSVDNDASNMKIGDSGIQGHPYACMQDSSELFHSSGQVDSQNQTQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGEDPLRSGWQLVFVDRENDMLLLGDDPWESFVSNVWYIKILSPEDIQKMGEQVVGLESLGHNA 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1025 811 FunFam Auxin response factor 706 798 - -
Mibi08g1025 811 CDD B3_DNA 126 226 IPR003340 GO:0003677
Mibi08g1025 811 ProSiteProfiles PB1 domain profile. 711 793 IPR000270 GO:0005515
Mibi08g1025 811 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Mibi08g1025 811 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 798 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mibi08g1025 811 SUPERFAMILY DNA-binding pseudobarrel domain 111 256 IPR015300 -
Mibi08g1025 811 FunFam Auxin response factor 291 363 - -
Mibi08g1025 811 Gene3D - 291 363 - -
Mibi08g1025 811 Gene3D - 706 798 - -
Mibi08g1025 811 Gene3D - 125 228 IPR015300 -
Mibi08g1025 811 SMART B3_2 127 229 IPR003340 GO:0003677
Mibi08g1025 811 SUPERFAMILY CAD & PB1 domains 701 783 - -
Mibi08g1025 811 FunFam Auxin response factor 125 229 - -
Mibi08g1025 811 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Mibi08g1025 811 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1025 Mibi-ChrMibi08 23939179 23953187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1025 97 803 B3 DNA Binding Superfamily AT5G37020 64.088 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mibi08g1025 B3 1.7e-20 CL0405