Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0988 ATGCTTGCTGCTGCTTCTTTCACTTCCAAACGCATTCGAGCTTCGGATTTTCTTCAACGTGATGCTACTAGACCCGTGATGGTATCACGTGGTGCCTCTGCTTTAAGTTATTTTGAAAATTCTGCTTTTGTTGATTGGAGTAGAAACTATGGGATTAGCAATCGAGTTCGATCGATTGTTAGTCTCTCTGGCTTCAGCACATTCCCTAGTCGTAGTAAAATTAGTAAAGATTGCTTTAGGGTCAATCCGATTGCTCCCAGAAGATGTACAAGTGTACTTCCTAGTATAAAGGGGTTTCTCTCTGATTCTTCACCTTCTAATTCCTATTCTTCACTATATGGCAGAGTAACTAGACCATGCTTTCCTCAACCTGGTTCTACGGTAGATGGGCGAGCATTGTTCTCAACTTCAACTAAAACTGATGATGGAACGTCCTCAAAGAAGATTGAGACCCAGAATCAAAAGACTCCTAGCACAGTTGGTAAAACTTCTTCAGGGGAACAAATTGCTGATGTTAAAATTCTCCGTACACTTGCGAGTTACTTGTGGATGAAGGATAATCTTGAATTTCGGATCCGGGTTATTGCTTCTTTGGGTTTTCTTGTTGGTGCTAAGGTTTTGAATGTTCAGGTCCCTTTCTTATTCAAGCTTGCAGTTGATTGGTTGACAACTGCTACAAGCAATGTTGGTGATCTTGCTTCTTTTGCAGCTGCAAATTCAACTCTGTTAGCTCTTTTCGCAACTCCAGCATCTGTGTTAATCGGATATGGAATTGCTCGTTCAGGAGCTGCTGCTTTCAATGAACTGCGTACTGCTGTATTCTCTAAAGTAGCATTGCGAACAATTCGATTAGTATCTAGAAAGGTGTTTTTACATTTGCATGAGCTTGACCTACGCTATCATCTAAGTCGAGAAACTGGAGCACTAAATAGAATAATTGATCGTGGTAGTCGAGCAATAAATTTTATACTCTCATCTATGGTGTTCAATGTAGTACCCACTATATTAGAGATATCTATGGTATCAGGTATACTGGCTTACAAATTTGGAGCACCTTTTGCTTGGATTACATCCTTATCAGTTGCTGCTTATGTTGTTTTTACACTGACTGTGACACAGTGGAGGACTAAATTCAGGAAGGCCATGAATCAAGCTGATAATGATGCCAGTACCAGGGCGGTTGATTCACTCATTAATTATGAGACTGTCAAGTATTTCAATAATGAAGGTTATGAAGGTGCAAAATATGATGAGTACCTAAAGAGGTATGAAGATGCTGCTCTGAAAACACAACGCAGTCTTGCTTCTCTGAACTTCGGTCAAAATGTTATATTTAGCACTGCACTTTCTACAGCTATGGTGCTGTCTTCTCATGGGATTATGAGTGGCCAGATGACTGTTGGTGATTTGGTGATGGTGAATGGGCTCCTCTTCCAACTTTCCCTTCCTCTTAATTTCCTTGGCAGTGTTTATCGTGAGACTATACAGAGTTTAGTTGACATGAAGTCAATGTTTCAGTTGCTCGAGGAAAGAGCTGATGTTAGGGATAAAGACAATGCAAAACCGCTGGAATTAGATGGAGGGAACATAGAATTTGAAAATGTACATTTCAGTTACCTTGCAGAGAGAAAAATACTCGATGGAATATCTCTTGTTGTGCCAGCTGGAAAAAGTGTGGCAATTGTTGGAACAAGTGGAAGTGGTAAATCAACCATTCTTAGATTGCTCTTCAGGTTTTTTGACCCTTGTTCCGGAAGTATAAAGATAGATGGTCAAAATATCCAGGATGTAACCCTTGATAGTCTTCGGAAGTCTATTGGTGTTGTTCCACAAGATACAGTACTTTTCAATGATACAATATTTCACAACATCCATTATGGTCGACTTTCAGCCCCTAAAGAAGAAGTAATATTTTCTTTCTTCTTAATGTCCCCTGTCTATAAAGCTGCTCAACAAGCAGCAATTCATGACACTATCATGAATTTTCCTGAAACATATTCAACTGTTGTGGGGGAACGAGGGCTCAAGTTAAGTGGCGGTGAGAAGCAACGTGTTGCTCTGGCTCGTGCGTTTTTGAAAGCACCTCCAATTTTGTTATGTGATGAAGCTACGAGTGCACTTGACAGCACAACAGAAGCAGAGATATTAAATGCTTTGAAATCTTTGGCAAACAATCGCACTTCCATATTTATTGCTCACAGGCTTACTACTGCAATGCAGTGTGATGAGATTATAGTGTTGGAAAATGGAAAGGTAGTTGAACAAGGACCACATGAACTGCTCTTATCTAAGGCCGGAAGATATGCACAACTTTGGGCCCAGCAAAATAACACAGTTGATGCAGCCATGAATGTTGGGGCATAA 2364 0.4031 MLAAASFTSKRIRASDFLQRDATRPVMVSRGASALSYFENSAFVDWSRNYGISNRVRSIVSLSGFSTFPSRSKISKDCFRVNPIAPRRCTSVLPSIKGFLSDSSPSNSYSSLYGRVTRPCFPQPGSTVDGRALFSTSTKTDDGTSSKKIETQNQKTPSTVGKTSSGEQIADVKILRTLASYLWMKDNLEFRIRVIASLGFLVGAKVLNVQVPFLFKLAVDWLTTATSNVGDLASFAAANSTLLALFATPASVLIGYGIARSGAAAFNELRTAVFSKVALRTIRLVSRKVFLHLHELDLRYHLSRETGALNRIIDRGSRAINFILSSMVFNVVPTILEISMVSGILAYKFGAPFAWITSLSVAAYVVFTLTVTQWRTKFRKAMNQADNDASTRAVDSLINYETVKYFNNEGYEGAKYDEYLKRYEDAALKTQRSLASLNFGQNVIFSTALSTAMVLSSHGIMSGQMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEERADVRDKDNAKPLELDGGNIEFENVHFSYLAERKILDGISLVVPAGKSVAIVGTSGSGKSTILRLLFRFFDPCSGSIKIDGQNIQDVTLDSLRKSIGVVPQDTVLFNDTIFHNIHYGRLSAPKEEVIFSFFLMSPVYKAAQQAAIHDTIMNFPETYSTVVGERGLKLSGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVVEQGPHELLLSKAGRYAQLWAQQNNTVDAAMNVGA 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0988 787 MobiDBLite consensus disorder prediction 149 163 - -
Mibi08g0988 787 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 195 496 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0988 787 SMART AAA_5 555 751 IPR003593 -
Mibi08g0988 787 Gene3D - 522 784 IPR027417 -
Mibi08g0988 787 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 530 774 IPR003439 GO:0005524
Mibi08g0988 787 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 68 771 IPR039421 -
Mibi08g0988 787 FunFam ATP-binding cassette sub-family B member 7 166 518 - -
Mibi08g0988 787 Pfam ABC transporter transmembrane region 195 483 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0988 787 MobiDBLite consensus disorder prediction 124 163 - -
Mibi08g0988 787 SUPERFAMILY ABC transporter transmembrane region 189 510 IPR036640 GO:0005524|GO:0016020
Mibi08g0988 787 CDD ABCC_ATM1_transporter 530 775 - -
Mibi08g0988 787 CDD ABC_6TM_ATM1_ABCB7 197 504 - -
Mibi08g0988 787 Pfam ABC transporter 546 705 IPR003439 GO:0005524
Mibi08g0988 787 Gene3D ABC transporter type 1, transmembrane domain 181 520 IPR036640 GO:0005524|GO:0016020
Mibi08g0988 787 ProSitePatterns ABC transporters family signature. 677 691 IPR017871 GO:0005524|GO:0016887
Mibi08g0988 787 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 519 775 IPR027417 -
Mibi08g0988 787 FunFam ABC transporter B family member 25 522 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0988 Mibi-ChrMibi08 23229667 23240275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0988 366 784 Calmodulin-binding Proteins AT2G36910 35.035 1.08e-61 224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g0988 08 23229667 23240275 Mibi08g0988 08 23229667 23240275 ECH