Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0975 ATGGCAAAAGGTTGCGCTACCAACACATATGAAGAGGCTCGGAAGCAGCGGCTTGAAGAAAACAGAAAAAGATTTGAGGATCTGGGGATTTCAAAGATTTCAAAAAATTTATCTGAGATTGTCACACCAGAGAAGAAGGCTCCTTCGCAACGTCGACCAAAACAAAAATCAAATAGTAATGATGTTGTGGAACCAAGACGCTCTTCTCGTGTGCGAAATTCTGTTCCTTCATACCGTGAGGAGGTATTCATGGACCTTCCATCTTTGCGGAAGAGGCCACGGCGGTCCTCATCATCATGGGGAAGTTATGTTGCAAGACCACTGGATGAAATCAAAGAAGCCACAGATGAAGAAAGAAATCGTGCTTTCATGGCTGCGGAAACCCTTCTAACCAACTTACAGACTTCAAATCCAACATTTATTAAGTCAATGGTCCGGTCTCATGTTTATAGTTGCTTTTGGTTGGGTCTCCCTACTAGATTTTGCCAAGACCATCTTCCAAAGACTGCGTGGGACATGATTTTAGAGGATGAAAATGGCTTAGAATTTGAGGCTGTTTTCCTTGGCAATAGAACTGGGATTAGCGGAGGCTGGAGAGGGTTTGCTTTGGATCATAAGTTGGATGATGGTGATGCACTTGTTTTTGAATTAGTTGAACCTACGAGATTCAAGATTTACATTGTCAAAGCCTTTCCAGAGTCAGATGAAGAGGGACAGGAGATTTTGGATGAACAAGCTGATACTTGTGCAACCAAGAAGCACAAATCACTATCAAACAAGGCACAAATTCTGAAACGAAATATTGTGCATGACACTAAAGAATCTGCAAATTCTCAGGAACATATAGAAGAAGATAAAGTTGAAATCAAGCCACAAGGGTTAAATACAACCAGAAAAACTAGGTTTTCTCAGAAAGAATCTAAAGACTGTAAAATGCTTCCTTTTGATGGTTCAATAAAGGGAGGCAATATCGAAGGAGGGAAAAATTGTACTACTGAGAAAAAGAATTCTCAAGCAAACAAAACAAGGTCAAAACGTGGTAAACGAAATTGA 1053 0.4036 MAKGCATNTYEEARKQRLEENRKRFEDLGISKISKNLSEIVTPEKKAPSQRRPKQKSNSNDVVEPRRSSRVRNSVPSYREEVFMDLPSLRKRPRRSSSSWGSYVARPLDEIKEATDEERNRAFMAAETLLTNLQTSNPTFIKSMVRSHVYSCFWLGLPTRFCQDHLPKTAWDMILEDENGLEFEAVFLGNRTGISGGWRGFALDHKLDDGDALVFELVEPTRFKIYIVKAFPESDEEGQEILDEQADTCATKKHKSLSNKAQILKRNIVHDTKESANSQEHIEEDKVEIKPQGLNTTRKTRFSQKESKDCKMLPFDGSIKGGNIEGGKNCTTEKKNSQANKTRSKRGKRN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0975 350 Coils Coil 8 28 - -
Mibi08g0975 350 ProSiteProfiles B3 DNA-binding domain profile. 140 231 IPR003340 GO:0003677
Mibi08g0975 350 CDD B3_DNA 138 229 IPR003340 GO:0003677
Mibi08g0975 350 MobiDBLite consensus disorder prediction 45 68 - -
Mibi08g0975 350 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 36 231 IPR044837 -
Mibi08g0975 350 Gene3D - 114 231 IPR015300 -
Mibi08g0975 350 MobiDBLite consensus disorder prediction 293 350 - -
Mibi08g0975 350 SUPERFAMILY DNA-binding pseudobarrel domain 133 229 IPR015300 -
Mibi08g0975 350 SMART B3_2 140 231 IPR003340 GO:0003677
Mibi08g0975 350 MobiDBLite consensus disorder prediction 36 74 - -
Mibi08g0975 350 Pfam B3 DNA binding domain 140 227 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0975 Mibi-ChrMibi08 23073163 23077618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0975 10 230 B3 DNA Binding Superfamily AT5G58280 49.600 4.99e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi08g0975 B3 5e-15 CL0405