Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0974 ATGGGAAGGAGACCGGCGAGATGTTATCGTCAGATAAAGAACAAGCCATACCCGAAATCTCGATTCTGTCGGGGTGTACCTGACCCAAAGATCAGGATTTATGATGTAGGGATGAAGAAGAAAGGGGTGGATGAATTACCATGCTGTGTACATCTTGTATCATGGGAAAAAGAGAATGTTTCAAGTGAAGCACTTGAGGCTGCACGTATAGCATGTACAAAATACATGGCCAAAAATGCAGGAAAAGATGCTTTCCACCTACGAGTTAGGGCCCATCCTTTCCATGTTCTAAGAATCAACAAGATGCTTTCATGTGCTGGTGCTGATAGGCTTCAAACAGGAATGAGAGGTGCTTTTGGGAAACCATTAGGAACTTGTGCAAGAGTCAATATTGGTCAAGTTCTTCTCTCTGTTCGTTGCAGGGATCATCATAGCCACCATGCTCATGAGGCTCTTCGCCGTGCTAAGTTCAAGTTTCCCGGTTGTCAGAAGATCATCACCAGTAGGAAGTGGGGTTTTACCAAGATTAACCGTGCTGACTATCTGAAGCTTAGGTCAGAGAACCGAATTGTACCAGATGGAGTTAATGCCAAGGTTCTTGGATGTCATGGACCTTTGGCCTTGCGAGAGCCTGGAAGAGCTTTCCTGCCGGCTAATGCATAA 663 0.454 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDELPCCVHLVSWEKENVSSEALEAARIACTKYMAKNAGKDAFHLRVRAHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTCARVNIGQVLLSVRCRDHHSHHAHEALRRAKFKFPGCQKIITSRKWGFTKINRADYLKLRSENRIVPDGVNAKVLGCHGPLALREPGRAFLPANA 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0974 220 Pfam Ribosomal protein L16p/L10e 12 166 IPR016180 GO:0003735|GO:0005840|GO:0006412
Mibi08g0974 220 TIGRFAM uL16_euk_arch: ribosomal protein uL16 1 174 IPR001197 GO:0003735|GO:0005840|GO:0006412
Mibi08g0974 220 ProSitePatterns Ribosomal protein L10e signature. 108 129 IPR018255 GO:0003735|GO:0005840|GO:0006412
Mibi08g0974 220 Gene3D Ribosomal protein L10e/L16 1 214 IPR036920 GO:0003735|GO:0005840|GO:0006412
Mibi08g0974 220 CDD Ribosomal_L16_L10e 41 166 IPR016180 GO:0003735|GO:0005840|GO:0006412
Mibi08g0974 220 PANTHER 60S RIBOSOMAL PROTEIN L10 1 213 IPR001197 GO:0003735|GO:0005840|GO:0006412
Mibi08g0974 220 PIRSF RPL10a_RPL10e 1 182 IPR001197 GO:0003735|GO:0005840|GO:0006412
Mibi08g0974 220 SUPERFAMILY Ribosomal protein L16p/L10e 4 173 IPR036920 GO:0003735|GO:0005840|GO:0006412
Mibi08g0974 220 FunFam 60S ribosomal protein L10 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0974 Mibi-ChrMibi08 23068270 23071217 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0974 1 220 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 84.091 1.20e-138 385