Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0972 ATGGGAAGGAAATATGACATGGACCTATTGGTGTTTGAGTTGTGCTGGGAGATTTGTTTTGAACTTTTACTCATGAGATTGCTGGTTTTGGTTTTTTCAGGACCAGCGAGATGTTATCGTCAGATAAAGAACAAGCCATACCCGAAATCTCGATTCTGTCGCGGTGTACCTGACCCAAAGATCAGGATTTATGATGTAGGGATGAAGAAGAAAGGGGTTGATGAGTTTCCTTTCTGTGTGCATCTTGTATCATGGGAAAAAGAGAATGTTTCAAGTGAAGCACTTGAGGCTGCACGTATAGCTTGCAACAAATATATGGCCAAATTTGCAGGAAAAGATGCTTTTCACCTTAGAGTTCGAGTTCATCCTTTCCATGTTCTAAGAATCAACAAGATGCTTTCATGTGCTGGTGCTGATAGGCTTCAAACAGGAATGAGAGGTGCTTTTGGTAAACCACAAGGAACTTGTGCAAGAGTTAATATTGGTCAAGTTCTTCTCTCTGTTCGTTGTAAGGACAGCAATAGCCAACATGCTCAGGAGGCTTTGCGCCGTGCTAAGTTCAAGTTTCCCGGTCGCCAGAAGATCATTGTTAGCAGGAAGTGGGGATTCACCAAATTTAGCCGTGCTGACTATCTGAAGTTTAAGTCCGAGAACCGAGTTGTGCCAGATGGAGTCAATGCAAAGGTTCTTGGGTGCCATGGACCTTTGGCTTTGCGACAGCCTGGAAGAGCTTTCTTACCAGTAAATGCATAA 753 0.4343 MGRKYDMDLLVFELCWEICFELLLMRLLVLVFSGPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVNIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKSENRVVPDGVNAKVLGCHGPLALRQPGRAFLPVNA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0972 250 FunFam 60S ribosomal protein L10 32 236 - -
Mibi08g0972 250 ProSitePatterns Ribosomal protein L10e signature. 138 159 IPR018255 GO:0003735|GO:0005840|GO:0006412
Mibi08g0972 250 CDD Ribosomal_L16_L10e 71 196 IPR016180 GO:0003735|GO:0005840|GO:0006412
Mibi08g0972 250 PANTHER 60S RIBOSOMAL PROTEIN L10 35 243 IPR001197 GO:0003735|GO:0005840|GO:0006412
Mibi08g0972 250 Gene3D Ribosomal protein L10e/L16 33 244 IPR036920 GO:0003735|GO:0005840|GO:0006412
Mibi08g0972 250 SUPERFAMILY Ribosomal protein L16p/L10e 35 203 IPR036920 GO:0003735|GO:0005840|GO:0006412
Mibi08g0972 250 TIGRFAM uL16_euk_arch: ribosomal protein uL16 35 204 IPR001197 GO:0003735|GO:0005840|GO:0006412
Mibi08g0972 250 Pfam Ribosomal protein L16p/L10e 42 196 IPR016180 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0972 Mibi-ChrMibi08 23051480 23053570 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0972 35 250 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 85.185 3.96e-138 385