Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0967 ATGGCGACGCTATTGAGGAAAATGTGGGATTCCGTATCGAACAGTCGTTCGAGTTCGAGTTCCAATTCCAAATCCCCCGAACGCTCTCGTTCCGTTGATTCTCCTCTTGGCGTATTCTTCGAGAAAATTCCTTCCGATATTTTGATCCAAATCCTCAGGCTTCTTGGTCCCAAAGAAGCTGCGAAATTGGCTCTTGTTTGCAAAGCATGGAAATCTCTGGCTTCTGATAATCGCTTGTGGATTTATTTCCTTCAGAATCACAAATTTGAGCCTTGGGATACCATCTTTTTCGCCGAGTCCTATTTGAGGTCCGGTCATCCTCTTCCAACATTGGTTGGTCAGATCCCTCAGTTATCTTTCAAGAGCATATATGGACTAAGAGAACAAGTTCCTGGTGCTGTTATTATCGATGGTGGTTCTGGCTATTGCAAGTTTGGTTGGAGCAAATATGACGGTCCATCAGGGCGATCGGCTACCTTTTTGGAATTCGGCAACCTTGAGTCTCCAATGTACACTAGACTTAGACATTTCTTTGCAACTATTTATAGCAGGATGCAGGTTAAACCGAGTACTTATCCAGTCATCGTTTCTATTCCAATATGCCATTATGACGATACTGAATCTGCCAAAGCATCAAGGCGGCAGCTTAAGGAGGCAATATGTGCTGCCCTCTTTGACATGAATGTTCCTGCTATTTGTGCTGTCAACCAGGCCACTTTGTCTCTGTATGCTGCAAAACAAACTTCTGGAATAGCCGTTAATGTTGGTTTCCAGGTCACATCCATAGTTCCAATTTTGAATGGTAAAGTTATGCGCAAGGTGGGTGTGGAAGTTGTGGGACTCGGAGCAATCAAACTTACAGGATTCCTTAGGGAGCTGATGCAACGGAACAACATGAATTTTGAATCTTTGTATACTGTTCGCACACTAAAAGAGAAACTATGCTATGTTGCTATTGATTATGAAGCTGAACTATCAAAAAATACACAAGCATCATTTGAAGCAGCAGGAGAAGGATGGTTTACACTTTCTAAAGAGCGGTTTCAAACAGGAGAGATATTGTTCCAGCCTCGTCTTGGTGGATTGCAAGCAATGGGTTTGCACCAGGCTGTAGCTCTTTGTATGGACCATTGCCATTCTGCAGAATTAGCAGGTGACCCTGATTGGTTTAAGACTGTAGTTTTAGCAGGGGGCACTGCTTGTTTACCAGGTCTCGCAGAAAGGTTAGATAAGGAACTCCGAGAGTTATTACCTCCTCAGTTGTCCAGTGGAATCAAAGTCATACCTCCTCCATATGGTGCTGATACTGCATGGTTTGGAGCAAGGACCATTGGCAATTTGAGCACCTTTCCTGGTCCATGGTGCATAAGGAAGAAGCACTTTCACAAGTCTCGACTCAATCTCATTTGGTGA 1413 0.4381 MATLLRKMWDSVSNSRSSSSSNSKSPERSRSVDSPLGVFFEKIPSDILIQILRLLGPKEAAKLALVCKAWKSLASDNRLWIYFLQNHKFEPWDTIFFAESYLRSGHPLPTLVGQIPQLSFKSIYGLREQVPGAVIIDGGSGYCKFGWSKYDGPSGRSATFLEFGNLESPMYTRLRHFFATIYSRMQVKPSTYPVIVSIPICHYDDTESAKASRRQLKEAICAALFDMNVPAICAVNQATLSLYAAKQTSGIAVNVGFQVTSIVPILNGKVMRKVGVEVVGLGAIKLTGFLRELMQRNNMNFESLYTVRTLKEKLCYVAIDYEAELSKNTQASFEAAGEGWFTLSKERFQTGEILFQPRLGGLQAMGLHQAVALCMDHCHSAELAGDPDWFKTVVLAGGTACLPGLAERLDKELRELLPPQLSSGIKVIPPPYGADTAWFGARTIGNLSTFPGPWCIRKKHFHKSRLNLIW 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0967 470 Pfam Actin 180 458 IPR004000 -
Mibi08g0967 470 MobiDBLite consensus disorder prediction 8 32 - -
Mibi08g0967 470 Pfam F-box-like 41 80 IPR001810 GO:0005515
Mibi08g0967 470 Gene3D - 36 106 - -
Mibi08g0967 470 PANTHER ACTIN 175 462 IPR004000 -
Mibi08g0967 470 SMART actin_3 131 461 IPR004000 -
Mibi08g0967 470 SUPERFAMILY Actin-like ATPase domain 248 459 IPR043129 -
Mibi08g0967 470 SMART fbox_2 43 83 IPR001810 GO:0005515
Mibi08g0967 470 CDD NBD_sugar-kinase_HSP70_actin 134 278 - -
Mibi08g0967 470 SUPERFAMILY F-box domain 35 97 IPR036047 GO:0005515
Mibi08g0967 470 Gene3D - 238 436 - -
Mibi08g0967 470 ProSiteProfiles F-box domain profile. 37 83 IPR001810 GO:0005515
Mibi08g0967 470 Gene3D - 174 461 - -
Mibi08g0967 470 SUPERFAMILY Actin-like ATPase domain 132 253 IPR043129 -
Mibi08g0967 470 MobiDBLite consensus disorder prediction 8 30 - -
Mibi08g0967 470 Gene3D Actin; Chain A, domain 4 281 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0967 Mibi-ChrMibi08 22978106 22984293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0967 180 469 Cytoskeleton Gene Families AT3G12110 31.773 1.52e-39 145