LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi08g0928	ATGATTTTCAAGACTCTTCTTTCTGGTTCTGCCAATAAATCCAATTGCATTTTGCTTCTCCTCTTCTCTCGCCTTCTGATTCTGGACACCGCTTCTCTCTCTCTCCTCCTTCTCCTTTTCCGATTCAATTCTGAAGTGATTTTGAGGTCTCTGCCAATGGCTGCTAAATCTGTTGCAGACTTAATAGAGTCATCCTCCCGGGCTCATTATTCAGGATTTCACATGGATAAAATAAATGCTGGAACAGAGCCTCCAACAACCTCTGTAGCTGAACACATGTTTAATCAACCTTTTGTCATAGGTGTTGCTGGGGGAGCTGCAGCTGGGAAAACTGAAGTTTGTAATATGATCATTCAGCAACTTCATGACCAACGAGCTGTAGTTGTTAGTCAGGATTCTTTCTATCATAATCTGATGGGGGATGAACTTACTAGAGTACAAGATTACAACTTTGATCATCCTGATGCTTTTGATACTGAGGAATTACTTGGAGTTATGGACAACTTGAAGCATGGACAAGCTGTAGATATTCCAAATTATGACTTCAAGAGTTATAAAAGGGATGCATTTCCAGCCAGACGGGTGAACCCTTCTGATGTAATAATTTTGGAAGGAATTCTTATTTTCCATGATCCTCGAGTTCGGGAGTTGATGAATATGAAAATATTTGTTGACACAGATGCTGATGTTCGACTGGCTAGGAGGATCAAGCGTGATACGGTTCAGAAGGGTCGAGATATTGGTACTGTGCTTGATCAGTATTCTAAATTTGTAAAGCCAGCTTTTGATGACTTTATTCTTCCAACGAAGAAGTATGCTGATATCATTATACCCCGTGGAGGAGACAATCATGTAGCAATCGATTTAATTGTACAGCATATCCGCACAAAACTGGGTCAGCATGATCTATGTAAAATATATCCTAACCTTTATGTTATCCACTCAACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATTGTCAAATTAAAACGCATGATTTTGTATTTTATTCCGACCGTTTGATTCGTCTGGTTGTTGAACATGGCTTGGGACATCTGCCATTTACAGAAAAACAAGTTATCACTCCGACTGGGTCTGTATACACTGGTGTCGATTTTTGTAAGAGGTTATGTGGAGTCTCTGTCGTCAGGAGCGGGGAGAGTATGGAGAATGCTTTACGAGCTTGCTGTAAAGGCATAAAGATTGGCAAAATTCTTATTCATAGAGAAGGGGAAGGAGATAACAGTCAGCAGCTGATATATGAAAAATTGCCTAATGATATCTCAGATAGGCACGTGTTGCTGTTGGATCCCATCCTAGGCACAGGAAATTCGGCTGTTCAAGCGATTAATTTACTTATAAAAAAGGGTGTACCAGAGTCCAACATTATATTTCTCAATCTCATATCGGCACCCCAAGGTGTGCATGTGGTCTGCAAAGCCTTTCCCAGAATTAAAATAGTGACTTCTGAGATCGAATTGGGCTTGAATAAAGACTTCCGTGTCGTGCCGGGAATGGGCGAGTTTGGGGACCGGTATTTCGGCACAGATGATGATCAGCAATTGGTGGTGGTCCCTTCACAGTAG	1593	0.4131	MIFKTLLSGSANKSNCILLLLFSRLLILDTASLSLLLLLFRFNSEVILRSLPMAAKSVADLIESSSRAHYSGFHMDKINAGTEPPTTSVAEHMFNQPFVIGVAGGAAAGKTEVCNMIIQQLHDQRAVVVSQDSFYHNLMGDELTRVQDYNFDHPDAFDTEELLGVMDNLKHGQAVDIPNYDFKSYKRDAFPARRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIKRDTVQKGRDIGTVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIHSTFQIRGMHTLIRDCQIKTHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVVRSGESMENALRACCKGIKIGKILIHREGEGDNSQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAINLLIKKGVPESNIIFLNLISAPQGVHVVCKAFPRIKIVTSEIELGLNKDFRVVPGMGEFGDRYFGTDDDQQLVVVPSQ	530

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi08g0928	530	SUPERFAMILY	PRTase-like	300	519	IPR029057	-
	Mibi08g0928	530	FunFam	Uridine kinase	94	300	-	-
	Mibi08g0928	530	Pfam	Uracil phosphoribosyltransferase	315	518	-	-
	Mibi08g0928	530	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	91	290	IPR027417	-
	Mibi08g0928	530	CDD	PRTases_typeI	374	491	IPR000836	-
	Mibi08g0928	530	Gene3D	-	301	518	IPR029057	-
	Mibi08g0928	530	CDD	UMPK	110	297	IPR000764	-
	Mibi08g0928	530	Gene3D	-	94	300	IPR027417	-
	Mibi08g0928	530	TIGRFAM	udk: uridine kinase	97	297	IPR000764	-
	Mibi08g0928	530	FunFam	Uridine kinase	301	518	-	-
	Mibi08g0928	530	PANTHER	URIDINE KINASE	85	428	-	-
	Mibi08g0928	530	PRINTS	Uridine kinase signature	97	114	-	-
	Mibi08g0928	530	PRINTS	Uridine kinase signature	229	239	-	-
	Mibi08g0928	530	PRINTS	Uridine kinase signature	127	138	-	-
	Mibi08g0928	530	PRINTS	Uridine kinase signature	265	278	-	-
	Mibi08g0928	530	PRINTS	Uridine kinase signature	172	187	-	-
	Mibi08g0928	530	PRINTS	Uridine kinase signature	243	254	-	-
	Mibi08g0928	530	Pfam	Phosphoribulokinase / Uridine kinase family	99	285	IPR006083	GO:0005524\|GO:0016301

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi08g0928	Mibi-ChrMibi08	22164993	22175209	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi08g0928	53	521	PRT Gene Family	AT4G26510	82.452	0.0	801

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mibi05g1551	05	18266873	18274443	Mibi08g0928	08	22164993	22175209	CCT
	Mibi08g0928	08	22164993	22175209	Mibi08g0928	08	22164993	22175209	ECH