Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0916 ATGAATTCAGGGTCCTTGATTTCCTTTGCTTCATCAAACTCTGCATCAAGAGAAGATAGAGTGGCTAGTACCAGAACCAGGCCTTCTCCTCATAATTCAAGGCCTTCCTTTTTGATTAGAATGGCGATGAGAATATCAAGAGCAAGATGGTTCACTTTCTTAAGAAGAGTTTTCCATTACCAAAATGCGTCAAGGTCTGATCTTGGCTCCAATCCTTTCAATTCCAACACATGGATGACACTAGAGTTCATTGCTTTGATGGTTCAGATAAGCCTAACAACCTTGGTTTTGGCCATTTCTAAGAGGGAGAGACCTGTTTGGCCTATGAGGATTTGGATTTCTGGTTATGATATTGGCTGCCTGCTTAATCTGCTGCTTCTTTATGGGCGATATCGTCAGCTTTATTTGTCTCATGGTGATGCTCTTAGCCTCTCTGATATGGAACAACAAAGAGGCAATGAAGAAACCAGGTGTTCACATCTGATGAACAAATGCCGGACATCACTTGAGCTTTTCTTTGCGATATGGTTTGTGATGGGAAATGTTTGGGTTTTTGACTCACGTTTTGGTTCATTCCAAAGAGCTCCAAAGCTACACGTGCTCTGCATCTCCTTGCTTGCTTGGAATGCCATAACTTACTCTTTCCCTTTCCTTCTCTTCCTCTTGCTTTGTTGCTGTGTGCCTCTTATCAGCAGCCTCCTTGGTTACAACATGAACTTGGCATCTTCTGATAAAGGAGCTTCTGATGATCAAATCTCAGCGCTTCCAAGTTGGAGATACAAACAAGTTCATAACAAGTTGGAGAATTGCCATGATTCTTCAGCCAGTGAAGGACTGATCCATGAAGATCCTGAATGTTGCATTTGCTTAACCAAATACAAAGACAGAGAAGAAGTGAGGCAATTGCCGTGTTCTCATATGTTTCACCAAAAATGTGTGGATCAATGGCTCAGAATCATATCTTGTTGCCCTCTATGTAAACAAGGATTACAGAGATAG 999 0.4174 MNSGSLISFASSNSASREDRVASTRTRPSPHNSRPSFLIRMAMRISRARWFTFLRRVFHYQNASRSDLGSNPFNSNTWMTLEFIALMVQISLTTLVLAISKRERPVWPMRIWISGYDIGCLLNLLLLYGRYRQLYLSHGDALSLSDMEQQRGNEETRCSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPKLHVLCISLLAWNAITYSFPFLLFLLLCCCVPLISSLLGYNMNLASSDKGASDDQISALPSWRYKQVHNKLENCHDSSASEGLIHEDPECCICLTKYKDREEVRQLPCSHMFHQKCVDQWLRIISCCPLCKQGLQR 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0916 332 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 11 330 - -
Mibi08g0916 332 MobiDBLite consensus disorder prediction 1 19 - -
Mibi08g0916 332 MobiDBLite consensus disorder prediction 1 34 - -
Mibi08g0916 332 ProSiteProfiles Zinc finger RING-type profile. 286 327 IPR001841 -
Mibi08g0916 332 CDD RING-H2_RNF111_like 284 327 - -
Mibi08g0916 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 235 331 IPR013083 -
Mibi08g0916 332 SUPERFAMILY RING/U-box 274 330 - -
Mibi08g0916 332 SMART ring_2 286 326 IPR001841 -
Mibi08g0916 332 Pfam Ring finger domain 285 327 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0916 Mibi-ChrMibi08 21914861 21917578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0916 37 330 C3H Transcription Factor Family AT4G26580 72.635 2.87e-154 434