Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0908 ATGATCCCTTTCATTATTATTTCCACCAATTTCTTGCTATGCATAACTTCTCAAATTTTGTTGCCAACTAGAGCTGCCATGGCCACCAGCTCACAGACTGATAGGCTTGCTTTGCTTTCTCTAAAGGATAAGCTAACCAATGGAAATCCAGAAGCTTTACCTTCATGGAATGATTCTGTCCACTTCTGCAAATGGCAAGGCGTTACATGCAATCTCCATCACATGAGAGTCGTGGTTTTGAACTTGACAAATCAAAATTTGGGGGGCACTATTGCACCAGCATTAGGTAACTTAACCTTTCTTAAACTACTCAATCTTCCGTATAATGGATTGCATGGTCAAATTCCCAAACAAATCGGTCGTCTTAAACGATTATTGTCACTAAATTTGCGCAAAAATTTTCTTGAGGGACAAGTACCCATAGAGTTGGCTAATTGTTCCAAACTCCAAGAGATTGTACTCGTTTCCAATAATTTGACCGGGGAAATTCCCTTTTGGTTTGGATCTATGCAACAAATTATAGTGCTGGAACTTGGTGTTAATAAATTTCATGGAAATATTCCACCATCCTTGGGAAATCTTTCATCCTTAGAGCATTTGTCTCTTGCATATAATAATTTGGAAGGAAGTGTACCTCAATCTTTAGGTGGAGTGTCAAATTTGTACTTGCTCTTCCTTGGTAACAATAGCCTTTCTGGTAGAATCCCTTATTCACTTTATAATCTTTCTCGCATGGAATATTTGGATCTTCCTTTCAACTACTTGACTGGAACTATTTCATCAAATATTGGCATTGCTTTCCCAAAACTTCGACATTTTAATGTGGGTTACAATATGTTGACGGGAACCATTCCAGCTTCCTTTTCCAACATGTCTCAATTGCAGTTATTTGCAATAGCTGAAAATTCTTTCAGGGGTCTAATCCCTACCTCTTTGGGAAAACTACAAAACCTTCGTGTATTTGAGATTCTCACAAATAATTTTGGGAGTGAAGAAGGTCATCATGATCTGGATTTCCTCTCTTCATTAACAAATTGTAGTCAATTGCAAGAAATAGAGATGCTTGATAATAAACTTAGTGGTGTGTTGCCAAATTCGATCGGAAATCTCTCTTCCCAACTTGATTGGCTTAGTATGGGATCCAATCTTATCTTTGGAAGCATACCTAAAGAGATTGGGCAACTAGTTGGCTTAACTTTCATTAATTTTGAAGAAAATTTCCTCCAAGGAACAATTCCACATTCAATTGGGAAGCTTGAAGATCTTGAAGAGTTATTCCTAGACCAAAATCAATTATTTGGTAGAATTCCTGATATGTTTGAAAATCTTACTAAGTTATATGATCTTTCATTGTCTAATAATAATTTGGAGGGAACCATTCCAATAAGCCTCAAATATTGCAAAGGTATGCAATACTTGTTCATAGATCAAAATAACTTGAGCGGAAATATACCAAATCTAACTTTTGGTCATCTAGAAAGCTTAATAAACCTTGTCATGTTTTCCAATTCCTTGATTGGTCCCATTCCATCTGTGATTGGTAACATGAAGCAATTAGTGGGATTATATTTGAGTGAAAATAAATTTTCTGGTGATATTCCAATGGAACTTGGCAAATGCCAACAGTTGGCAGATGTTAATATGAGTGGGAACTTCCTCAGTGGAAGTATCCCCTCATCCTTTAGTTCCTTAAAGTCTCTGATCAATTTAGACCTTTCGAACAATAACTTATCAGGAACAATCCCACAAGAACTAAAAGATCTTTCAATATTGGTCACCCTGAACCTATCTCACAACTACTTTTATGGTGAGGTTCCAAAAGGAGGAGTTTTTGATAATATCACAGCTATTTCACTCACACGAAATAAAAATCTTTGCGGTGGAATACCTCAACTGATGCTACCTATATGCCCAAGTAAGTCGAAGAAGCATTTCACCAAAGTCATAATTCTTACCATTGTCATAGGTGGTGCTCTTACTTGTTTTGCAATTTTTCTAATCATTTGCAAGAGAAGAAAACATATGAAGTTGCTTTCCACCCAATCTTACCTACAAAATACTCATTTGAGAGTTTCTTATAAAGAGTTGCATGATGCAACCAATGGATTTTCTTCATCCAATTTGGCTGGAGTAGGAAGCTTTGGTTCTGTATACAAAGGAACTCTTCAACACTTTGAAAAACCTATTGCTGTAAAGGTGCTAAATCTTCAAGAACATGGAGCAACAAAGAGTTTCATCACAGAATGCAAAACTCTTAGTAAAGTCCGGCATAGAAATCTTTTGAAGATTTTGACTTCATGTTCAAGTATTGATTACAATGGCAATGATTTTAAGGCCCTTGTTTTTGAGTTCATGCATAACGGGAGCTTGGAGAATTGGTTGTCAGTAAACAAGCTCAATGAACCTAGAAATTTATACATGAATTTCAGACAAAGATTGGATGTTGCTATTGATGTGGCTCATGCTTTGGATTATCTTCATCATGATTTTGAGGAAACTATTGTTCATTGTGACATCAAGCCAAGCAATGTTCTTCTTAGTGATGATATGGTGGCATGTTTGGGTGACTTTGGACTTGCTAGGCTTCTTCATGAAGATACAAGCTATTCTGGTGAGGGTCAAACTACATCCTCAACATTTATTAAGGGAACAATTGGGTATATTCCTCCAGAGTATGGAGAAAGCGGCCAAGTTACAAGAGAAGGGGATATATATAGCTATGGGGTTCTTATGCTAGAGATGATCACTAGAAAGAAGCCCACTGATGGTATGTTCCATGAGGATCTAAGCCTGCCCAAATTATGCAAACTTGCATTACCAGATGGAGTCCTTGAGATTGTTGATTCAAATTTGCTTGCTTTATCTGATAGAGATCAAAGGGAATTAATGCATATTTCAAATATAAAACACAAAATTCAAGAGTCCTTAGCTAGCTTTGTTGGGATTGGAGTGGCATGTTGTGCAGAATTACCTGGTGAAAGAATGGGTATCAAAGATGTCTTGACAGAGTTGCTTGCAATTAAGCAAAAGCTATCCACTTTCAACATTGTCATGTGA 3057 0.368 MIPFIIISTNFLLCITSQILLPTRAAMATSSQTDRLALLSLKDKLTNGNPEALPSWNDSVHFCKWQGVTCNLHHMRVVVLNLTNQNLGGTIAPALGNLTFLKLLNLPYNGLHGQIPKQIGRLKRLLSLNLRKNFLEGQVPIELANCSKLQEIVLVSNNLTGEIPFWFGSMQQIIVLELGVNKFHGNIPPSLGNLSSLEHLSLAYNNLEGSVPQSLGGVSNLYLLFLGNNSLSGRIPYSLYNLSRMEYLDLPFNYLTGTISSNIGIAFPKLRHFNVGYNMLTGTIPASFSNMSQLQLFAIAENSFRGLIPTSLGKLQNLRVFEILTNNFGSEEGHHDLDFLSSLTNCSQLQEIEMLDNKLSGVLPNSIGNLSSQLDWLSMGSNLIFGSIPKEIGQLVGLTFINFEENFLQGTIPHSIGKLEDLEELFLDQNQLFGRIPDMFENLTKLYDLSLSNNNLEGTIPISLKYCKGMQYLFIDQNNLSGNIPNLTFGHLESLINLVMFSNSLIGPIPSVIGNMKQLVGLYLSENKFSGDIPMELGKCQQLADVNMSGNFLSGSIPSSFSSLKSLINLDLSNNNLSGTIPQELKDLSILVTLNLSHNYFYGEVPKGGVFDNITAISLTRNKNLCGGIPQLMLPICPSKSKKHFTKVIILTIVIGGALTCFAIFLIICKRRKHMKLLSTQSYLQNTHLRVSYKELHDATNGFSSSNLAGVGSFGSVYKGTLQHFEKPIAVKVLNLQEHGATKSFITECKTLSKVRHRNLLKILTSCSSIDYNGNDFKALVFEFMHNGSLENWLSVNKLNEPRNLYMNFRQRLDVAIDVAHALDYLHHDFEETIVHCDIKPSNVLLSDDMVACLGDFGLARLLHEDTSYSGEGQTTSSTFIKGTIGYIPPEYGESGQVTREGDIYSYGVLMLEMITRKKPTDGMFHEDLSLPKLCKLALPDGVLEIVDSNLLALSDRDQRELMHISNIKHKIQESLASFVGIGVACCAELPGERMGIKDVLTELLAIKQKLSTFNIVM 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0908 1018 SMART LRR_typ_2 588 613 IPR003591 -
Mibi08g0908 1018 SMART LRR_typ_2 443 467 IPR003591 -
Mibi08g0908 1018 SMART LRR_typ_2 564 587 IPR003591 -
Mibi08g0908 1018 SMART LRR_typ_2 419 442 IPR003591 -
Mibi08g0908 1018 SMART LRR_typ_2 194 217 IPR003591 -
Mibi08g0908 1018 SUPERFAMILY Protein kinase-like (PK-like) 683 1004 IPR011009 -
Mibi08g0908 1018 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 69 334 - -
Mibi08g0908 1018 SUPERFAMILY L domain-like 372 627 - -
Mibi08g0908 1018 Gene3D Phosphorylase Kinase; domain 1 666 784 - -
Mibi08g0908 1018 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 785 1015 - -
Mibi08g0908 1018 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 341 1005 - -
Mibi08g0908 1018 Gene3D Ribonuclease Inhibitor 180 332 IPR032675 -
Mibi08g0908 1018 SMART serkin_6 703 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0908 1018 FunFam LRR receptor-like serine/threonine-protein kinase EFR 674 784 - -
Mibi08g0908 1018 FunFam LRR receptor-like serine/threonine-protein kinase EFR 335 643 - -
Mibi08g0908 1018 Pfam Leucine rich repeat 148 207 IPR001611 GO:0005515
Mibi08g0908 1018 Pfam Leucine rich repeat 542 600 IPR001611 GO:0005515
Mibi08g0908 1018 Gene3D Transferase(Phosphotransferase) domain 1 785 1016 - -
Mibi08g0908 1018 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Mibi08g0908 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Mibi08g0908 1018 Gene3D Ribonuclease Inhibitor 30 179 IPR032675 -
Mibi08g0908 1018 Gene3D Ribonuclease Inhibitor 333 646 IPR032675 -
Mibi08g0908 1018 Pfam Protein kinase domain 708 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0908 1018 ProSiteProfiles Protein kinase domain profile. 703 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0908 1018 Pfam Leucine Rich Repeat 269 291 IPR001611 GO:0005515
Mibi08g0908 1018 SUPERFAMILY L domain-like 59 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0908 Mibi-ChrMibi08 21673356 21676646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0908 30 1010 Receptor kinase-like Gene Family AT3G47570 42.671 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mibi08g0908 Pkinase 2.4e-39 CL0016