Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0895 ATGTATTCCGAAAGTACCCTTTTTCTGTTCCTTCTCTTCTTTTTCTTAGACCCAACAGTGTTAGCCCAAAACCTCACATTTGAATTCCCTTCCTTCTCTTCTCTTCGGAACATCACTCTCGCAGGCGATTCCTTTCTCCGAAACTGCATCATCGGCCTCACCAAATCGTCCGATGTGCCTACTTCAAGTGCCGGAGTCGTAATCTACAACGATCCAATTTCTCTCTTCAACCCACAATCAAACACTTCCTCTTCATTCTTAACATCCTTCTCTTTCTCCATCACCGACAACCTTAACAACCCTCCTTCCCTCGTTGATGGTTCCTTATCTTTCTTTCTATTTCCCAGCAACCACACTCTTTCAAGCGTTGATGGGTATTTGGGTCTCATCAATTCCTCCCAATTGACCCGATCCAGCTCAGTTTTTGTTGAATTCAAGCCCAATGATAATCGCATCGAGTTGGATCTGAATGGCGTTGCTTTGATTAATGCCACTGGAGATACAATCTTGCAGGGCATTGATATGAAGAGTGGGAAATTGATTACAGCTTGGGTTGATTATGATAGTGAAAAGAGGAAGCTTCAAGTGTTTCTGAGTTATGATAATTTGAGCTCAAACTTGAAGCCTGAGATTCCGATTCTGAATGTTGATGATCTTGACCTTTCTGGGTATATGAAGGAGATAGTGTATGTGGGGTTTGCTGCTTCCACTGAAGGAAGCACTGAGCTTCATCAGCTTGTGAACTGGAGATTTTATGGTAATGGGTCTCTTCCTGCAACATCATCACCAAATTTTCACACTCATAATGTTTCTAATAGCATGGTGAGTGCAACAGCGGACGTTCATAACAAGTCCCATAACAATTCCAGCAGCAAGCATGATAAAAGGCTTGGATTAGGTATAGCCATTGCTGGGCCAGCTTTTTTCTGTGTAGTTCTGTTAAGTTTGGGTTACGTTTCTGTACGGAAATGGAGAAATAGTGGAATATTGAAGAGGGTGAAAAGTGAGCTAATGGCTTGTCCTAGGGAATTTGGCTACAAAGAATTGAAGGTAGCCACAAAAGGGTTTCACCCAAGTAGGATCTTAGGGCAAGGATCTTTTGGGACAGTTTATAAAGCCTTGTTACTACCATCAGGAACCATTGCTGCTGTGAAAAGGTCAAGGCACTCTCATGATGGAAAAACAGAATTTCTGGCTGAACTTTCCATCATAGCTGGTTTGAGGCACAAGAATCTGGTTCAGCTCCAAGGTTGGTGTGTTGACAAGGGAGAGTTGTTGCTTGTGTATGACTTCATGCCGAATGGAAGCTTAGACAAGATGCTCTACCAAGAATCTGATGAGAGCCAGAACCTGTTGAACTGGTCTCGTAGACTTAATATTGCTATTGGGTTGGCTTCTGTTCTGACTTACCTCCACCAAGAATGTGAGAAAAGAGTCATTCACAGAGACATTAAGACTGGGAACATATTGTTAGATGCAAATTACAACTCGAGGTTGGGAGATTTCGGATTGGCGAAGCTGATGGATCATGATAGAAGCCCGGTTTCTACGCTAACAGCAGGAACAATGGGGTATCTTGCACCTGAGTATCTTCAATATGGGATGGCTACTGAGAAAACTGATGTTTTCAGCTATGGTGTGGTTGTTCTTGAAGTGGCATGTGGGAGGAGGCCAATTGAAAGGGAAGGCCAAAACATGGTGAATTTGGTTGATTGGGTTTGGAGGCTTCACTCTCAAGGGAAGATAGTTGAAGCAGCTGATAAAAGGTTGAACGGAGAATTTACAGAGAAAGAGATGAAGAAACTTTTGCTCTTGGGGTTGAGCTGTGCAAACCCAGATAGTGCTGAAAGGCCTTCCATGACGAGGGTTTTGCAGATTCTCAGCAACGATGACGAAGCAGCAAGCACGCTTGTCGTGCCAAAGGTTAAACCATTCCTCACCTTCTCTTGTGGCTTGCCTTTGAGTCTTGATGAGATTGTTTCAGATAGTGATGGGGAGTTCAGTACTGAGAAGTCCTTGTGCCAGATAAGAATTGACCAAAATACTAGTTAA 2052 0.4323 MYSESTLFLFLLFFFLDPTVLAQNLTFEFPSFSSLRNITLAGDSFLRNCIIGLTKSSDVPTSSAGVVIYNDPISLFNPQSNTSSSFLTSFSFSITDNLNNPPSLVDGSLSFFLFPSNHTLSSVDGYLGLINSSQLTRSSSVFVEFKPNDNRIELDLNGVALINATGDTILQGIDMKSGKLITAWVDYDSEKRKLQVFLSYDNLSSNLKPEIPILNVDDLDLSGYMKEIVYVGFAASTEGSTELHQLVNWRFYGNGSLPATSSPNFHTHNVSNSMVSATADVHNKSHNNSSSKHDKRLGLGIAIAGPAFFCVVLLSLGYVSVRKWRNSGILKRVKSELMACPREFGYKELKVATKGFHPSRILGQGSFGTVYKALLLPSGTIAAVKRSRHSHDGKTEFLAELSIIAGLRHKNLVQLQGWCVDKGELLLVYDFMPNGSLDKMLYQESDESQNLLNWSRRLNIAIGLASVLTYLHQECEKRVIHRDIKTGNILLDANYNSRLGDFGLAKLMDHDRSPVSTLTAGTMGYLAPEYLQYGMATEKTDVFSYGVVVLEVACGRRPIEREGQNMVNLVDWVWRLHSQGKIVEAADKRLNGEFTEKEMKKLLLLGLSCANPDSAERPSMTRVLQILSNDDEAASTLVVPKVKPFLTFSCGLPLSLDEIVSDSDGEFSTEKSLCQIRIDQNTS 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0895 683 CDD lectin_legume_LecRK_Arcelin_ConA 25 255 IPR001220 GO:0030246
Mibi08g0895 683 Gene3D Transferase(Phosphotransferase) domain 1 432 640 - -
Mibi08g0895 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 261 IPR013320 -
Mibi08g0895 683 Pfam Protein kinase domain 357 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0895 683 FunFam L-type lectin-domain containing receptor kinase VIII.1 432 648 - -
Mibi08g0895 683 ProSiteProfiles Protein kinase domain profile. 356 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0895 683 ProSitePatterns Protein kinases ATP-binding region signature. 362 385 IPR017441 GO:0005524
Mibi08g0895 683 SMART serkin_6 356 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0895 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Mibi08g0895 683 FunFam L-type lectin-domain containing receptor kinase VIII.1 320 431 - -
Mibi08g0895 683 Gene3D - 22 254 - -
Mibi08g0895 683 SUPERFAMILY Protein kinase-like (PK-like) 340 645 IPR011009 -
Mibi08g0895 683 CDD STKc_IRAK 362 627 - -
Mibi08g0895 683 PANTHER - 48 630 - -
Mibi08g0895 683 Pfam Legume lectin domain 25 260 IPR001220 GO:0030246
Mibi08g0895 683 Gene3D Phosphorylase Kinase; domain 1 321 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0895 Mibi-ChrMibi08 21005316 21007367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0895 20 666 Receptor kinase-like Gene Family AT5G55830 57.489 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi08g0895 Pkinase 1e-49 CL0016