Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0880 ATGGCCAGTAATGGTGCAAGGGAGCCCTTGTTGCCACAATTACCTGATCCAGCACCTCAAAAAACAAATGGCCAGGTTAGCAGGAAAAAGTTTCTCCGTTGTAGAAGTGCTCCTCTTGCTAATATTGATCCACCTGAGAAAACCGACATGAGCTCAATTCAACGTTCTGAGTCCATATTTGAGAAGTTACATCCAAGTTTTCGAAATGTGGCTATATATCTTATAGGGTATTTAGGTATTGGAGCTGTGATCTTCTATCTCGTAAGGCACCAGATCACGGGGAAGAAAACAGAGGGGGTCCTTGATGCTATATACTTTACAATTGTCACGATGACCACCGTCGGATATGGAGATCTTGTACCAAATAGTGACCTTACAAAACTTCTTGCCTGTGCTTTTGTCTTCACAGGAATGGCACTAGTCGGTTTAATCTTAAGTAAAGCTGCTGACTACTTAGTTGAGAAGCAGGAAGTTTTGATAATCAAAGCTCTTCATAGGAACCGTAGAGCTGGTCCAACTCAAATTCTAAAGGAGGTTGAGGTCAACAAGATGTGGTATAAATTTTTTGTGGTACTTTTCCTGCTTTTGGCGATCATTGTAACGGGGACGATTTTCTTAGTTACAGTTGAAAAGTTGGATGTTATTGACGCCTTTTATTGTGTTTGTTCTACAATAACAACCCTGGGTTATGGTGATAAAAGCTTTTCAAGTGAAGGTGGAAGAGTCTTTGCTGTGTTTTGGATATTGACAGGTACTATTTGTTTAGGTCAGCTTTTCCTTTACATTGCTGAGCTGAACACTGAAAAAAGACAAAAGGAAATCACTGAGATGGTTCTTACACGGAGAACAACCAATGCAGACTTGGAGGCAGCTGATCTTGATCATGATGGAACTGTTGGGGTTGCTGAGTTTATTATTTATAAGCTCAAAGAGATGGGGAAGATAAGTCAAGAAGATATCTCACTCGTAATGAAAGAGTTTGAGGAGCTTGATTTTGATCAATCTGGTACTCTTTCACCTTCTGATATAAATCTTGCTCAGGCACCTGATCCATCTTAG 1059 0.4032 MASNGAREPLLPQLPDPAPQKTNGQVSRKKFLRCRSAPLANIDPPEKTDMSSIQRSESIFEKLHPSFRNVAIYLIGYLGIGAVIFYLVRHQITGKKTEGVLDAIYFTIVTMTTVGYGDLVPNSDLTKLLACAFVFTGMALVGLILSKAADYLVEKQEVLIIKALHRNRRAGPTQILKEVEVNKMWYKFFVVLFLLLAIIVTGTIFLVTVEKLDVIDAFYCVCSTITTLGYGDKSFSSEGGRVFAVFWILTGTICLGQLFLYIAELNTEKRQKEITEMVLTRRTTNADLEAADLDHDGTVGVAEFIIYKLKEMGKISQEDISLVMKEFEELDFDQSGTLSPSDINLAQAPDPS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0880 352 FunFam Calcium-activated outward-rectifying potassium channel 1 64 159 - -
Mibi08g0880 352 ProSitePatterns EF-hand calcium-binding domain. 292 304 IPR018247 -
Mibi08g0880 352 ProSitePatterns EF-hand calcium-binding domain. 331 343 IPR018247 -
Mibi08g0880 352 Gene3D - 64 158 - -
Mibi08g0880 352 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 70 321 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mibi08g0880 352 MobiDBLite consensus disorder prediction 1 27 - -
Mibi08g0880 352 FunFam Two-pore potassium channel 1 168 276 - -
Mibi08g0880 352 PRINTS Two pore domain K+ channel signature 109 137 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mibi08g0880 352 PRINTS Two pore domain K+ channel signature 226 235 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mibi08g0880 352 SUPERFAMILY Voltage-gated potassium channels 180 316 - -
Mibi08g0880 352 Gene3D - 254 349 - -
Mibi08g0880 352 SUPERFAMILY EF-hand 282 343 IPR011992 -
Mibi08g0880 352 Gene3D - 183 253 - -
Mibi08g0880 352 SUPERFAMILY Voltage-gated potassium channels 66 159 - -
Mibi08g0880 352 Pfam Ion channel 72 153 IPR013099 -
Mibi08g0880 352 Pfam Ion channel 194 265 IPR013099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0880 Mibi-ChrMibi08 20479165 20481434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0880 1 347 Ion Channels AT5G55630 56.474 3.97e-141 402