Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0871 ATGTTATGTGAGATTCAGAGGCAAAACAAGAAGAAGAAAATGTCATTAGAAAACAGAGTTTTAGTTTTGTTTGTTTTGGTGATTTTCTTGGTGGGTTTTTTGGCAGTAGAAAGTTCTGATAATGGTGGAGGGTTTGTGAGAGATTACATTACGTGGGATGATTTGACTGTGGATGGAAATGGCTTAGCCTCAAAATCTAACAGTGAAGATGTCCAAGTTATTGTGGTTGATCAGAATGGAAATGGAGATTCTTCTACAGTTCAAGGAGCTGTTGATATGATTCCAGATCATAACACACAGAGAGTGAAGATATACATTTCTCCAGGAACTTACAGAGAAAAGGTGTTTGTACCAAAGAACAAGCCATATGTGTCATTTATAGGGAAAATGAATGAAACACATGGAGTGGTGATTACTTGGAACAGCAAATCATCAGACATAGGCTCAAATGGCCAAGAATTGGGGACTTTTGGTTCTGCAACTGTAGCAGTAGAATCTGATTACTTCTGTGCAAATAGGGTCACTTTTGAGAACTCTGTAGTTGCAAAGGCTGGTACACATGGAATGCAAGGAGTAGCATTGAGGGTAGATAGTGAGAGAGCACTATTCTATCAAGCTAGGATATTGGGAACACAAGACACTCTTTTGGATAACACTGGAACTCATTACTTCCTCAAATGTTTCATCCAAGGCAAAATTGACTTCATTTGTGGCAGTGCAAGATCACTCTATGAGGGTTGTCATCTGAAATCAACGGCTGATGACTTTGGAGCGATTGCGGCTCATCACAGGGATACACCCAATGAAGAGACAGGGTTTTCGTTTGTAGGCTGTTCAATTCAAGGAACTGGGAAGGTCTACCTTGGGAGAGCATGGGGAGACTATTCAAGAATCATATATTCAAACTGTTCTATGGATGACATTATAATCCCACAAGGATGGACTGAATGGAATCACCCTTCAAGAAAGAAGACTGCACTTTTTGGAGAGTTTCAGTGCCAAGGAAAAGGAGCAGAGAGAAGTCATAGAGTTTCATGGTCAAAATCTTTCACTTATGAGGAAGCAAGGCCTTTTATGGATAGAAGCTTCATAAATGGAGACCAATGGCTTAGATTGTAG 1119 0.4004 MLCEIQRQNKKKKMSLENRVLVLFVLVIFLVGFLAVESSDNGGGFVRDYITWDDLTVDGNGLASKSNSEDVQVIVVDQNGNGDSSTVQGAVDMIPDHNTQRVKIYISPGTYREKVFVPKNKPYVSFIGKMNETHGVVITWNSKSSDIGSNGQELGTFGSATVAVESDYFCANRVTFENSVVAKAGTHGMQGVALRVDSERALFYQARILGTQDTLLDNTGTHYFLKCFIQGKIDFICGSARSLYEGCHLKSTADDFGAIAAHHRDTPNEETGFSFVGCSIQGTGKVYLGRAWGDYSRIIYSNCSMDDIIIPQGWTEWNHPSRKKTALFGEFQCQGKGAERSHRVSWSKSFTYEEARPFMDRSFINGDQWLRL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0871 372 FunFam Pectinesterase 69 372 - -
Mibi08g0871 372 Pfam Pectinesterase 74 367 IPR000070 GO:0030599|GO:0042545
Mibi08g0871 372 Gene3D - 68 372 IPR012334 -
Mibi08g0871 372 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 63 371 - -
Mibi08g0871 372 SUPERFAMILY Pectin lyase-like 73 370 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0871 Mibi-ChrMibi08 20293662 20295713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0871 20 324 Carbohydrate Esterase AT5G55590 52.778 1.09e-124 360