Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0857 ATGTCGTTTGTTTTCTCACATAACTCTCTAATGTACTATGCCGCGAGTCTTCTGCTAAAACCCATTTTCTTCCATTTGTTATCTGCCTCTCTCCACCTAGTTTTGTTAATTGGGTTCTTTGTTTCATTGATATGGAATAAAATTGTTGTGGGTGAGAGAGATGGGTCGAAGGAGAAATTTAGGGGTACTCTGTATCCAAGGACTCTGTTTTGTTCTTTGGGTGCTTCTGCGTTTAATCTTGTCATGTGTCTACTGTGTTACTTCAATTGGTATCAAAATGGCTGGTCAGATGATAAGTTGGTGACCCTTTTGGATTTGGCGGTTAAAACAGTTGCTTGGGGTGTTGTTTGTGCTTACTTGCAGACAGGATTCTTCAACTCATGTGAAAGGAAGTTTCCGTTCTTCTTCAGAGCTTGGTGCGCTTTCTACCTCCTTATTTCTTGCTATTGTTTTGTACTGGAAGTTGTTCTTCATCTTGAACATGTTTGGTTACCACTTCAATACTTGATTTCTGATGGGGTCTCCTCCTTTGTGAGTATATTCTTTTGTTACGTGGTGTTTTTTGTGAAAAACGAGGGTGAAGATAACACTCTTCAAGAGCCTCTTTTGAATAGTAATTCTGGCGTATGTAATGGGTTAGAGTCAAATAAGACCAAGGGGGAGGAAACTGTTACTCCTTACTCAAATGCTGGATTTTTCAGCATTCTTACGTTCTCTTGGGTGGGTCCTCTGATTGCTACAGGCAAGCAGAAAACTTTAGACCTTGAGGATGTCCCTCAACTAGCTAGTTGTGATAGTGTAGCTGGAACTTTTCCCCCTTTTAGAAATGAACTTGAGGCTGAATGTGGCACAATAAACAGAGTGACCACACTCAAGTTGGTGAAGTCTTTAATACTCTCAGCTTGGAAAGAGATTTTTGCAACAGCCATTCTTGCACTTTTAAACACTTTGGCTTCTTATGTTGGTCCATATCTCATTGACACTTTTGTTCAATACCTCAATGGCAAACAAACATTTAAGAATGAGGGATATGTTCTTGTGGCTACATTTTTTGTTGCGAAGATTATAGAGTGCCTGTCGCAGAGACACTGGTTTTTTATATTGCAACAAATTGGAATTAGGATCCGAGCACAACTTGTGACAATGATTTATAGTAAAAGTTTGACTCTCTCCTGTCAAGCCAAGCAGAGCCACACTAGTGGAGAAATAATCAATTTTATGACCGTTGATGCTGAAAGAATTGGTGATTTCACCTGGTACATTCATGATCCATGGATGGTATTGTTGCAAGTAGTATTGGCCTTGTTTATTTTGTATAAAAATCTTGGGATGGCTGCGATTTCCGCATTTGTTGCTACTATTGTTGTAATGTTGGCAAATGTTCCCTTGGGCTCACTGCAGGAGAAGTTTCAAGACAAGTTAATGGCGTCAAAAGATAGCCGAATGAAGGTCACATCTGAGATTTTGAGGAACATGAGAATTCTCAAACTACAGGGATGGGAAATGAAGTTTCTATCTAAGGTAATTGAACTTAGGAAGACAGAGGAAGGCTGGTTAAGGAAATACTTCTACACATCATCCATCACCACCTTTGTGTTCTGGGGTGCACCCACATTTGTCTCTGTGGCTACCTTTGGTACTTGTGCACTTATGGGGATCCCACTTGAATCGGGGAAGATCTTATCTGCACTTGCAACATTCAGAATACTTCAGGAGCCCATTTATAATCTTCCAGACACAATTTCAATGATAGCACAAACTAAAGTATCATTGGATAGGATTGCATCATTCCTTCGACTTGATGACTTGCAATACGATGTTATAGATAAGCTTCCGAGGGGTAGTTCTAATACAGCAATTGAAGTAGTTAATGGTAATTTCTCTTGGGAATTATCTTCCTCTAATACGACATTGAAAGGTATAAATCTCACTGTTACACAAGGCATGAGGGTTGCTGTCTGTGGTACTGTTGGCTCAGGCAAGTCCAGTTTACTGTCATGTATTTTGGGAGAAGTGCCAAAGATATCAGGGACAATAAGGGTGTGTGGAACTAAGGCCTTTGTTGCTCAGTCTCCATGGATTCAAAGTGGAAAGATCGAAGACAATATATTATTTGGTAAGGAGATGGACAGGGAAAAGTATGAGAAGGTCCTTGAAGCATGTTCTCTAAAAAAGGACCTAGAGATTCTTCCATTTGGTGATCAGACAATTATTGGAGAGAGGGGAATCAATTTGAGTGGTGGACAGAAACAGAGAATTCAGATTGCACGAGCTCTCTACCAAGATGCTGATATATATCTATTCGATGATCCTTTTAGTGCTGTGGATGCGCATACTGGATCTCACCTTTTTAAGGAATGTTTACTAGGGTTTTTAAGTTCAAAGACAGTTATTTATATCACCCATCAAATAGAGTTCTTACCTGCTGCCAACTTTATTTTGGTCATGAAAGATGGAGAAATTACTCAGTGTGGAAAGTATAATGATTTGCTCAACTCAGGGACTGACTTTATGGAGCTTGTTGGGGCACATAAAAAAGCGTTATCTGCACTTGATTCATTGGATGAGGGGGAAGTGTCTAATAAATTAAGTGTAGCTGATCAAGAGGAAAGTATCTCTGGTGTACAAGTTACAGAGGAAAAAGAGGCAAACAATGATAGGCAAAGTGATAAAACAGATAACGTAGTTGAACCAACAGGCCAGCTTATTCAAGAGGAAGAAAGAGAGAAAGGTAGAGTTGGGCTTTCTGTCTACTGGAAATATATTACAACAGCATATGGAGGAGCTCTTGTGCCAATTATATTGTTGGCTCAAATTCTGTTTCAACTTCTTCAAATTGGAAGCAATTATTGGATGGCATGGGCAACTCCGATCTCTTCAGATGTGAAACCACCAGTCGGAACCTTTATGCTTATAATTGTCTATGTTGCTATGGCCATAGGAAGTGCTTTCTGTATCCTTGCTAGAGCGATTCTTCTATCCACAGCTGGTTACAAGACTGCAACTCTACTCTTCAATAGAATGCACTTGTGCATCTTTCGTGCACCAATGTCATTTTTTGATGCCACTCCAAGTGGAAGGATTATTAACAGAGCCTCTACAGATCAAAGTGCAGTGGATTTAAACATTCCTTATCAAATTGGGTCATTTGCCTTCTCTATGATCCAACTTTTGGGAATAATAGCAGTGATGTCTCAGGCTGCATGGCAGGTTTTCATCATCTTTATACCTGTGATATCGATCAGCATTTGGTATCAGCAATATTATCTACCTTCAGCTCGAGAACTATCACGGTTGGTTGGAGTATGCAAAGCTCCAGTCATTCAACACTTTGCTGAAACTATTTCAGGATCAACAACCATCAGGAGCTTTGATCAAGATTCAAGATTTAAGGAAACAAATATGAAACTGATGGATGGGTATTCTCGGCCGAAATTTAACAGTGCGGCTGCTATGGAATGGCTTTGCATCCGCTTGGATATGTTGTCTTCTATCACATTTGTCTTTTCCTTGATATTCTTGATATTTATGCCACGGGGGGTCATTGATCCAGGTATTGCTGGTTTGGCTGTTACATATGGACTTAATCTGAACATGTTGCAAGCCTGGGTGATATGGAATCTTTGCAACTTGGAGAATAAAATTATATCAGTTGAGAGAATGCTTCAATATTGTAACATTCCGAGTGAGCCTCCTCTTGTAATAGAAGAAAATCGACCGAATCCTTCTTGGCCATTGCATGGAGAAGTTAATATCTGTGATCTGCAGGTTCGATATGCTCCACATCTACCACTTGTGTTGCGTGGCATAACATGCAAATTTCCTGGGGGACTGAAAACCGGCATTGTTGGGAGAACAGGAAGTGGTAAAACAACTCTCATACAGACACTTTTTCGAATTGTTGAGCCAACTGCGGGCCAAATTGTGATTGACGGCATCAACATTTCGACTATTGGACTTCATGATTTGAGGTCTAAACTTAGCATTATCCCTCAAGACCCAACCATGTTTGAAGGAACAGTGAGAAGCAACCTAGACCCATTGGAGGAGTACACTGATGAACAAATTTGGGAGGCTCTGGATAAGTGTCAACTTGGAGATGAAGTTCGAAAGAAAGAAGGAAAGCTAGATTCTGCAGTTAGTGAAAATGGTGAGAATTGGAGCATGGGTCAGAGACAATTGGTGTGTCTTGGGAGGGTGCTACTTAAAAGAAGCAAGGTATTAGTGCTTGATGAAGCTACTGCATCAGTTGATACTGCCACGGATAATTTGATTCAGAAAACTCTTCGCCAACACTTCTCTGACTGTACTGTCATTACAATTGCACACCGAATAACTTCTGTTCTTGACAGTGATATGGTTCTGCTGCTGAATCAAGGACTGATTGAGGAGTTTGATTCTCCAACAAGACTACTAGAAGACAAGTCATCTTCTTTTGCTGAGCTTGTTGCAGAGTATACCATGAGATCCAAGTCCACTTACCAATAA 4488 0.4026 MSFVFSHNSLMYYAASLLLKPIFFHLLSASLHLVLLIGFFVSLIWNKIVVGERDGSKEKFRGTLYPRTLFCSLGASAFNLVMCLLCYFNWYQNGWSDDKLVTLLDLAVKTVAWGVVCAYLQTGFFNSCERKFPFFFRAWCAFYLLISCYCFVLEVVLHLEHVWLPLQYLISDGVSSFVSIFFCYVVFFVKNEGEDNTLQEPLLNSNSGVCNGLESNKTKGEETVTPYSNAGFFSILTFSWVGPLIATGKQKTLDLEDVPQLASCDSVAGTFPPFRNELEAECGTINRVTTLKLVKSLILSAWKEIFATAILALLNTLASYVGPYLIDTFVQYLNGKQTFKNEGYVLVATFFVAKIIECLSQRHWFFILQQIGIRIRAQLVTMIYSKSLTLSCQAKQSHTSGEIINFMTVDAERIGDFTWYIHDPWMVLLQVVLALFILYKNLGMAAISAFVATIVVMLANVPLGSLQEKFQDKLMASKDSRMKVTSEILRNMRILKLQGWEMKFLSKVIELRKTEEGWLRKYFYTSSITTFVFWGAPTFVSVATFGTCALMGIPLESGKILSALATFRILQEPIYNLPDTISMIAQTKVSLDRIASFLRLDDLQYDVIDKLPRGSSNTAIEVVNGNFSWELSSSNTTLKGINLTVTQGMRVAVCGTVGSGKSSLLSCILGEVPKISGTIRVCGTKAFVAQSPWIQSGKIEDNILFGKEMDREKYEKVLEACSLKKDLEILPFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGFLSSKTVIYITHQIEFLPAANFILVMKDGEITQCGKYNDLLNSGTDFMELVGAHKKALSALDSLDEGEVSNKLSVADQEESISGVQVTEEKEANNDRQSDKTDNVVEPTGQLIQEEEREKGRVGLSVYWKYITTAYGGALVPIILLAQILFQLLQIGSNYWMAWATPISSDVKPPVGTFMLIIVYVAMAIGSAFCILARAILLSTAGYKTATLLFNRMHLCIFRAPMSFFDATPSGRIINRASTDQSAVDLNIPYQIGSFAFSMIQLLGIIAVMSQAAWQVFIIFIPVISISIWYQQYYLPSARELSRLVGVCKAPVIQHFAETISGSTTIRSFDQDSRFKETNMKLMDGYSRPKFNSAAAMEWLCIRLDMLSSITFVFSLIFLIFMPRGVIDPGIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERMLQYCNIPSEPPLVIEENRPNPSWPLHGEVNICDLQVRYAPHLPLVLRGITCKFPGGLKTGIVGRTGSGKTTLIQTLFRIVEPTAGQIVIDGINISTIGLHDLRSKLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSAVSENGENWSMGQRQLVCLGRVLLKRSKVLVLDEATASVDTATDNLIQKTLRQHFSDCTVITIAHRITSVLDSDMVLLLNQGLIEEFDSPTRLLEDKSSSFAELVAEYTMRSKSTYQ 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0857 1495 SMART AAA_5 1276 1461 IPR003593 -
Mibi08g0857 1495 SMART AAA_5 647 820 IPR003593 -
Mibi08g0857 1495 FunFam ABC transporter C family member 10 289 602 - -
Mibi08g0857 1495 Pfam ABC transporter 638 772 IPR003439 GO:0005524
Mibi08g0857 1495 FunFam ABC transporter C family member 5 895 1231 - -
Mibi08g0857 1495 SUPERFAMILY ABC transporter transmembrane region 296 599 IPR036640 GO:0005524|GO:0016020
Mibi08g0857 1495 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 620 843 IPR003439 GO:0005524
Mibi08g0857 1495 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 227 1484 - -
Mibi08g0857 1495 Gene3D - 1233 1486 IPR027417 -
Mibi08g0857 1495 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 306 586 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0857 1495 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1250 1484 IPR003439 GO:0005524
Mibi08g0857 1495 MobiDBLite consensus disorder prediction 874 893 - -
Mibi08g0857 1495 CDD ABCC_MRP_domain2 1248 1468 - -
Mibi08g0857 1495 CDD ABCC_MRP_domain1 620 820 - -
Mibi08g0857 1495 ProSitePatterns ABC transporters family signature. 745 759 IPR017871 GO:0005524|GO:0016887
Mibi08g0857 1495 Gene3D ABC transporter type 1, transmembrane domain 895 1231 IPR036640 GO:0005524|GO:0016020
Mibi08g0857 1495 Gene3D ABC transporter type 1, transmembrane domain 284 602 IPR036640 GO:0005524|GO:0016020
Mibi08g0857 1495 Pfam ABC transporter transmembrane region 306 573 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0857 1495 Pfam ABC transporter transmembrane region 933 1177 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0857 1495 FunFam ABC transporter C family member 3 1233 1485 - -
Mibi08g0857 1495 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 933 1213 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g0857 1495 Pfam ABC transporter 1267 1415 IPR003439 GO:0005524
Mibi08g0857 1495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 842 IPR027417 -
Mibi08g0857 1495 MobiDBLite consensus disorder prediction 870 903 - -
Mibi08g0857 1495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1240 1481 IPR027417 -
Mibi08g0857 1495 FunFam ABC transporter C family member 5 605 852 - -
Mibi08g0857 1495 Gene3D - 604 862 IPR027417 -
Mibi08g0857 1495 SUPERFAMILY ABC transporter transmembrane region 931 1232 IPR036640 GO:0005524|GO:0016020
Mibi08g0857 1495 CDD ABC_6TM_ABCC_D1 308 594 IPR044746 GO:0140359
Mibi08g0857 1495 CDD ABC_6TM_ABCC_D2 931 1225 IPR044726 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0857 Mibi-ChrMibi08 19761032 19766866 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0857 620 849 Calmodulin-binding Proteins AT2G36910 30.000 7.24e-26 114